Halobacterium sp. NRC-1 NP_045984

5
6 2 0 4 1 0 0 0 Halobacterium sp. NRC-1 NP_045984 Halobacterium sp. NRC-1 NP_046115 Halobacterium sp. NRC-1 NP_395927 Halobacterium sp. NRC-1 NP_395611 Halobacterium salinarum R1 YP_001690410 Halobacterium salinarum R1 YP_001690911 Saccharopolyspora erythraea NRRL 2338 YP_001105158 Nocardia farcinica IFM 10152 YP_117796 Mycobacterium smegmatis str. MC2 155 YP_889839 Frankia sp. EAN1pec YP_001510823 Frankia sp. CcI3 YP_479373 Frankia alni ACN14a YP_710879 Herpetosiphon aurantiacus ATCC 23779 YP_001545011 Symbiobacterium thermophilum IAM 14863 YP_075521 Gramella forsetii KT0803 YP_861002 Anaeromyxobacter dehalogenans 2CP-C YP_464151 Anaeromyxobacter sp. Fw109-5 YP_001378174 Myxococcus xanthus DK 1622 YP_635027 Sorangium cellulosum So ce 56 YP_001613076 Bacillus subtilis subsp. subtilis str. 168 NP_390949 Bacillus amyloliquefaciens FZB42 YP_001422361 Bacillus pumilus SAFR-032 YP_001487928 Bacillus licheniformis ATCC 14580 YP_080351 Bacillus licheniformis ATCC 14580 YP_092768 Bacillus halodurans C-125 NP_241744 Bacillus clausii KSM-K16 YP_174786 Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001376946 Bacillus cereus ATCC 14579 NP_834887 Bacillus weihenstephanensis KBAB4 YP_001647789 Bacillus thuringiensis serovar konkukian str. 97-27 YP_039214 Bacillus anthracis str. Ames NP_847628 Bacillus thuringiensis str. Al Hakam YP_897414 Bacillus anthracis str. Sterne YP_031312 Bacillus anthracis str. Ames Ancestor YP_022123 Bacillus cereus E33L YP_086487 Bacillus cereus ATCC 10987 NP_981630 Picrophilus torridus DSM 9790 YP_023387 Picrophilus torridus DSM 9790 YP_023642 Thermoplasma volcanium GSS1 NP_110602 Thermoplasma acidophilum DSM 1728 NP_394935 Thermoplasma acidophilum DSM 1728 NP_394452 Thermoplasma volcanium GSS1 NP_111251 Exiguobacterium sibiricum 255-15 YP_001814487 Lysinibacillus sphaericus C3-41 YP_001695995 Bacillus halodurans C-125 NP_244843 Oceanobacillus iheyensis HTE831 NP_691971 Geobacillus kaustophilus HTA426 YP_147937 Geobacillus kaustophilus HTA426 YP_146457 Geobacillus thermodenitrificans NG80-2 YP_001124645 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 YP_301795 Staphylococcus epidermidis ATCC 12228 NP_764339 Staphylococcus epidermidis RP62A YP_188257 Staphylococcus haemolyticus JCSC1435 YP_253784 Staphylococcus aureus subsp. aureus MRSA252 YP_040473 Staphylococcus aureus subsp. aureus JH1 YP_001316309 Staphylococcus aureus subsp. aureus str. Newman YP_001331986 Staphylococcus aureus subsp. aureus Mu3 YP_001441668 Staphylococcus aureus subsp. aureus USA300 YP_493684 Staphylococcus aureus subsp. aureus N315 NP_374205 Staphylococcus aureus subsp. aureus JH9 YP_001246522 Staphylococcus aureus subsp. aureus USA300 TCH1516 YP_001574927 Staphylococcus aureus subsp. aureus NCTC 8325 YP_499580 Staphylococcus aureus subsp. aureus MSSA476 YP_043145 Staphylococcus aureus subsp. aureus COL YP_185958 Staphylococcus aureus subsp. aureus Mu50 NP_371610 Staphylococcus aureus subsp. aureus MW2 NP_645785 Staphylococcus aureus RF122 YP_416437 Burkholderia vietnamiensis G4 YP_001116207 Syntrophobacter fumaroxidans MPOB YP_847118 Syntrophobacter fumaroxidans MPOB YP_847160 Anabaena variabilis ATCC 29413 YP_320073 Anabaena variabilis ATCC 29413 YP_324548 Synechococcus elongatus PCC 6301 YP_173035 Synechococcus elongatus PCC 7942 YP_400784 Gloeobacter violaceus PCC 7421 NP_924143 Cyanothece sp. ATCC 51142 YP_001804829 Anabaena variabilis ATCC 29413 YP_320076 Nostoc sp. PCC 7120 NP_488064 Anabaena variabilis ATCC 29413 YP_322192 Acaryochloris marina MBIC11017 YP_001520281 Synechocystis sp. PCC 6803 NP_440505 Thermosynechococcus elongatus BP-1 NP_682392 Synechococcus sp. JA-3-3Ab YP_475181 Synechococcus sp. JA-2-3Ba2-13 YP_477446 Bradyrhizobium japonicum USDA 110 NP_766923 Burkholderia multivorans ATCC 17616 YP_001585770 Azorhizobium caulinodans ORS 571 YP_001524270 Methylobacterium radiotolerans JCM 2831 YP_001757504 Hahella chejuensis KCTC 2396 YP_432017 Marinomonas sp. MWYL1 YP_001342988 Francisella philomiragia subsp. philomiragia ATCC 25017 YP_001677725 Francisella tularensis subsp. novicida U112 YP_899232 Francisella tularensis subsp. holarctica FTA YP_001429301 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_094253 Legionella pneumophila str. Paris YP_122602 Legionella pneumophila str. Corby YP_001249616 Legionella pneumophila str. Lens YP_125621 Rhodopseudomonas palustris HaA2 YP_483827 Parvibaculum lavamentivorans DS-1 YP_001411876 Alcanivorax borkumensis SK2 YP_694142 Colwellia psychrerythraea 34H YP_270499 Saccharophagus degradans 2-40 YP_526702 Vibrio cholerae O1 biovar eltor str. N16961 NP_231211 Vibrio cholerae O395 YP_001217121 Methylibium petroleiphilum PM1 YP_001021761 Bradyrhizobium japonicum USDA 110 NP_770368 Bordetella petrii DSM 12804 YP_001629498 Bordetella parapertussis 12822 NP_885736 Bordetella bronchiseptica RB50 NP_890546 Bordetella pertussis Tohama I NP_881775 Chromobacterium violaceum ATCC 12472 NP_903328 Mesorhizobium loti MAFF303099 NP_105373 Jannaschia sp. CCS1 YP_508678 Dinoroseobacter shibae DFL 12 YP_001534022 Azoarcus sp. BH72 YP_933275 Ralstonia solanacearum GMI1000 NP_522803 Ralstonia metallidurans CH34 YP_587360 Polaromonas sp. JS666 YP_550908 Polaromonas naphthalenivorans CJ2 YP_980736 Halorhodospira halophila SL1 YP_001003985 Alkalilimnicola ehrlichei MLHE-1 YP_742877 Chromohalobacter salexigens DSM 3043 YP_574051 Marinobacter aquaeolei VT8 YP_958735 Mesorhizobium sp. BNC1 YP_676598 Xanthobacter autotrophicus Py2 YP_001416174 Ralstonia solanacearum GMI1000 NP_522768 Burkholderia vietnamiensis G4 YP_001115027 Burkholderia multivorans ATCC 17616 YP_001585473 Burkholderia pseudomallei 668 YP_001062961 Burkholderia pseudomallei 1106a YP_001075908 Burkholderia pseudomallei K96243 YP_111388 Methylobacterium extorquens PA1 YP_001639446 Methylobacterium sp. 4-46 YP_001768208 Xanthomonas campestris pv. campestris str. ATCC 33913 NP_638161 Xanthomonas campestris pv. campestris str. 8004 YP_242389 Xanthomonas axonopodis pv. citri str. 306 NP_643292 Xanthomonas campestris pv. vesicatoria str. 85-10 YP_364860 Xanthomonas oryzae pv. oryzae MAFF 311018 YP_450200 Xanthomonas oryzae pv. oryzae KACC10331 YP_199912 Xanthomonas campestris pv. campestris str. ATCC 33913 NP_639037 Xanthomonas campestris pv. campestris str. 8004 YP_244822 Xanthomonas axonopodis pv. citri str. 306 NP_644042 Xanthomonas campestris pv. vesicatoria str. 85-10 YP_365585 Xanthomonas oryzae pv. oryzae KACC10331 YP_199278 Xanthomonas oryzae pv. oryzae MAFF 311018 YP_449618 Psychrobacter arcticus 273-4 YP_264797 Psychrobacter cryohalolentis K5 YP_580955 Wolbachia endosymbiont of Drosophila melanogaster NP_966497 Rickettsia bellii RML369-C YP_537689 Rickettsia bellii OSU 85-389 YP_001496000 Rickettsia canadensis str. McKiel YP_001491977 Rickettsia felis URRWXCal2 YP_246349 Rickettsia akari str. Hartford YP_001493141 Rickettsia prowazekii str. Madrid E NP_220602 Rickettsia typhi str. Wilmington YP_067171 Rickettsia massiliae MTU5 YP_001499104 Rickettsia conorii str. Malish 7 NP_359925 Rickettsia rickettsii str. Sheila Smith YP_001494408 Rickettsia rickettsii str. Iowa YP_001649653 Idiomarina loihiensis L2TR YP_154434 Polynucleobacter sp. QLW-P1DMWA-1 YP_001156393 Granulibacter bethesdensis CGDNIH1 YP_743957 Zymomonas mobilis subsp. mobilis ZM4 YP_163306 Gluconobacter oxydans 621H YP_190717 Acidiphilium cryptum JF-5 YP_001235159 Enterobacter sakazakii ATCC BAA-894 YP_001439012 Xanthomonas campestris pv. campestris str. ATCC 33913 NP_638010 Xanthomonas campestris pv. campestris str. 8004 YP_242542 Nitrobacter hamburgensis X14 YP_571560 Methylobacterium extorquens PA1 YP_001641277 Methylobacterium radiotolerans JCM 2831 YP_001752902 Mesorhizobium sp. BNC1 YP_674974 Rhodospirillum rubrum ATCC 11170 YP_425651 Bradyrhizobium sp. ORS278 YP_001208645 Bradyrhizobium sp. BTAi1 YP_001236881 Rhodopseudomonas palustris BisB18 YP_529990 Rhodopseudomonas palustris BisA53 YP_779478 Rhodopseudomonas palustris CGA009 NP_950127 Rhodopseudomonas palustris HaA2 YP_488264 Rhodopseudomonas palustris BisB5 YP_571496 Methylobacterium sp. 4-46 YP_001771100 Methylobacterium radiotolerans JCM 2831 YP_001757570 Paracoccus denitrificans PD1222 YP_917772 Sphingomonas wittichii RW1 YP_001260922 Novosphingobium aromaticivorans DSM 12444 YP_496304 Sinorhizobium meliloti 1021 NP_384665 Sinorhizobium medicae WSM419 YP_001325865 Psychromonas ingrahamii 37 YP_943166 Roseobacter denitrificans OCh 114 YP_681157 Rhodobacter sphaeroides ATCC 17025 YP_001170018 Rhodobacter sphaeroides 2.4.1 YP_354730 Rhodobacter sphaeroides ATCC 17029 YP_001045802 Acinetobacter sp. ADP1 YP_046412 Acinetobacter baumannii ATCC 17978 YP_001084464 Acinetobacter baumannii AYE YP_001714068 Burkholderia xenovorans LB400 YP_557210 Burkholderia multivorans ATCC 17616 YP_001585362 Burkholderia ambifaria AMMD YP_777566 Burkholderia ambifaria MC40-6 YP_001816424 Burkholderia sp. 383 YP_366247 Burkholderia sp. 383 YP_366658 Burkholderia cenocepacia MC0-3 YP_001774662 Burkholderia cenocepacia AU 1054 YP_621301 Burkholderia cenocepacia HI2424 YP_840030 Burkholderia vietnamiensis G4 YP_001115242 Burkholderia xenovorans LB400 YP_553508 Burkholderia vietnamiensis G4 YP_001116102 Burkholderia multivorans ATCC 17616 YP_001583283 Burkholderia sp. 383 YP_370935 Burkholderia ambifaria AMMD YP_776701 Burkholderia ambifaria MC40-6 YP_001812025 Burkholderia cenocepacia AU 1054 YP_625229 Burkholderia cenocepacia HI2424 YP_839104 Burkholderia cenocepacia MC0-3 YP_001778411 Burkholderia thailandensis E264 YP_440336 Burkholderia pseudomallei 1710b YP_336927 Burkholderia mallei NCTC 10247 YP_001079272 Burkholderia mallei NCTC 10229 YP_001024930 Burkholderia pseudomallei 668 YP_001061434 Burkholderia mallei SAVP1 YP_990436 Burkholderia pseudomallei 1106a YP_001074378 Burkholderia pseudomallei K96243 YP_110254 Burkholderia mallei ATCC 23344 YP_106386 Marinomonas sp. MWYL1 YP_001341997 Ralstonia eutropha JMP134 YP_298301 Ralstonia eutropha H16 YP_840979 Methylobacillus flagellatus KT YP_545052 Methylobacillus flagellatus KT YP_545196 Bordetella parapertussis 12822 NP_883344 Bordetella bronchiseptica RB50 NP_887784 Bordetella petrii DSM 12804 YP_001632445 Azoarcus sp. EbN1 YP_159652 Ralstonia metallidurans CH34 YP_587086 Ralstonia eutropha JMP134 YP_298481 Ralstonia eutropha H16 YP_840698 Pseudomonas putida GB-1 YP_001669500 Gluconacetobacter diazotrophicus PAl 5 YP_001600819 Azorhizobium caulinodans ORS 571 YP_001526675 Pseudomonas aeruginosa PA7 YP_001348478 Pseudomonas aeruginosa PA7 YP_001346562 Pseudomonas aeruginosa PAO1 NP_252619 Pseudomonas aeruginosa UCBPP-PA14 YP_789187 Pseudomonas entomophila L48 YP_608020 Pseudomonas fluorescens Pf-5 YP_260833 Pseudomonas fluorescens PfO-1 YP_349115 Pseudomonas stutzeri A1501 YP_001172323 Pseudomonas mendocina ymP_YP_001186246 Pseudomonas fluorescens Pf-5 YP_262432 Pseudomonas syringae pv. phaseolicola 1448A YP_276457 Pseudomonas syringae pv. syringae B728a YP_237350 Pseudomonas syringae pv. tomato str. DC3000 NP_794399 Pseudomonas fluorescens PfO-1 YP_350621 Pseudomonas entomophila L48 YP_610218 Pseudomonas putida W619 YP_001747661 Pseudomonas putida KT2440 NP_746760 Pseudomonas putida F1 YP_001269817 Pseudomonas putida GB-1 YP_001670867 Photorhabdus luminescens subsp. laumondii TTO1 NP_929304 Vibrio parahaemolyticus RIMD 2210633 NP_800647 Shewanella sp. MR-7 YP_737020 Shewanella sp. ANA-3 YP_868569 Shewanella baltica OS155 YP_001049308 Shewanella baltica OS185 YP_001367639 Shewanella baltica OS195 YP_001555995 Shewanella sp. W3-18-1 YP_964615 Shewanella putrefaciens CN-32 YP_001182458 Yersinia enterocolitica subsp. enterocolitica 8081 YP_001006678 Serratia proteamaculans 568 YP_001479088 Citrobacter koseri ATCC BAA-895 YP_001452803 Enterobacter sp. 638 YP_001176857 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001335591 Enterobacter sakazakii ATCC BAA-894 YP_001438025 Enterobacter sp. 638 YP_001177845 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334816 Salmonella enterica subsp. arizonae serovar 62 YP_001571562 Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_454955 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_806232 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215388 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001589431 Salmonella typhimurium LT2 NP_459355 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151558 Flavobacterium johnsoniae UW101 YP_001197197 Acidobacteria bacterium Ellin345 YP_592327 Solibacter usitatus Ellin6076 YP_827888 Anaeromyxobacter sp. Fw109-5 YP_001378843 Rhodopirellula baltica SH 1 NP_869127 Candidatus Protochlamydia amoebophila UWE25 YP_008629 Chlamydia muridarum Nigg NP_296660 Chlamydia trachomatis D UW-3 CX NP_219515 Chlamydia trachomatis A HAR-13 YP_327811 Chlamydia trachomatis 434 Bu YP_001654352 Chlamydia trachomatis L2b UCH-1 proctitis YP_001653364 Chlamydophila abortus S26 3 YP_220039 Chlamydophila caviae GPIC NP_829534 Chlamydophila felis Fe C-56 YP_515258 Chlamydophila pneumoniae AR39 NP_445214 Chlamydophila pneumoniae TW-183 NP_876378 Chlamydophila pneumoniae CWL029 NP_224310 Chlamydophila pneumoniae J138 NP_300162 Anaeromyxobacter dehalogenans 2CP-C YP_466933 Heliobacterium modesticaldum Ice1 YP_001680379 Carboxydothermus hydrogenoformans Z-2901 YP_361239 Aquifex aeolicus VF5 NP_213934 Syntrophus aciditrophicus SB YP_461912 Pelobacter carbinolicus DSM 2380 YP_358496 Geobacter sulfurreducens PCA NP_952691 Geobacter metallireducens GS-15 YP_384884 Geobacter uraniireducens Rf4 YP_001230923 Pelobacter propionicus DSM 2379 YP_900848 Syntrophobacter fumaroxidans MPOB YP_844474 Desulfococcus oleovorans Hxd3 YP_001530529 Lawsonia intracellularis PHE MN1-00 YP_594652 Desulfovibrio desulfuricans G20 YP_389693 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough YP_012481 Desulfovibrio vulgaris subsp. vulgaris DP4 YP_965569 Symbiobacterium thermophilum IAM 14863 YP_074471 Methanosarcina acetivorans C2A NP_615957 Methanosarcina barkeri str. Fusaro YP_303687 Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001376669 Bacillus thuringiensis serovar konkukian str. 97-27 YP_038840 Bacillus cereus ATCC 10987 NP_981242 Bacillus cereus E33L YP_086122 Bacillus cereus ATCC 14579 NP_834494 Bacillus weihenstephanensis KBAB4 YP_001647411 Bacillus anthracis str. Ames NP_847241 Bacillus anthracis str. Sterne YP_030934 Bacillus anthracis str. Ames Ancestor YP_021698 Bacillus thuringiensis str. Al Hakam YP_897070 Moorella thermoacetica ATCC 39073 YP_430930 Desulfitobacterium hafniense Y51 YP_520289 Desulfotomaculum reducens MI-1 YP_001112992 Chlorobium tepidum TLS NP_662697 Chlorobium phaeobacteroides DSM 266 YP_911179 Pelodictyon luteolum DSM 273 YP_374406 Prosthecochloris vibrioformis DSM 265 YP_001130055 Listeria welshimeri serovar 6b str. SLCC5334 YP_850867 Listeria monocytogenes EGD-e NP_466240 Listeria innocua Clip11262 NP_472194 Listeria monocytogenes str. 4b F2365 YP_015286 Bacillus licheniformis ATCC 14580 YP_081211 Bacillus licheniformis ATCC 14580 YP_093640 Bacillus pumilus SAFR-032 YP_001488727 Bacillus subtilis subsp. subtilis str. 168 NP_391755 Bacillus amyloliquefaciens FZB42 YP_001423161 Bacillus weihenstephanensis KBAB4 YP_001644670 Bacillus cereus ATCC 14579 NP_831708 Bacillus cereus ATCC 10987 NP_978337 Bacillus thuringiensis str. Al Hakam YP_894553 Bacillus thuringiensis serovar konkukian str. 97-27 YP_036109 Bacillus cereus E33L YP_083355 Bacillus anthracis str. Sterne YP_028067 Bacillus anthracis str. Ames NP_844352 Bacillus anthracis str. Ames Ancestor YP_018587 Lactobacillus casei ATCC 334 YP_805320 Lactococcus lactis subsp. cremoris SK11 YP_808720 Lactococcus lactis subsp. lactis Il1403 NP_266860 Lactococcus lactis subsp. cremoris MG1363 YP_001033135 Enterococcus faecalis V583 NP_815724 Lactobacillus salivarius UCC118 YP_535923 Lactobacillus reuteri F275 YP_001271110 Streptococcus agalactiae 2603V R NP_688732 Streptococcus agalactiae NEM316 NP_736221 Streptococcus agalactiae A909 YP_330350 Lactobacillus plantarum WCFS1 NP_784802 Lactobacillus brevis ATCC 367 YP_795748 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 YP_818047 Leuconostoc citreum KM20 YP_001727748 Oenococcus oeni PSU-1 YP_811337 Lactobacillus casei ATCC 334 YP_807394 Lactobacillus johnsonii NCC 533 NP_965789 Lactobacillus gasseri ATCC 33323 YP_819534 Herpetosiphon aurantiacus ATCC 23779 YP_001546523 Deinococcus geothermalis DSM 11300 YP_594212 Acidothermus cellulolyticus 11B YP_872359 Leifsonia xyli subsp. xyli str. CTCB07 YP_062182 Clavibacter michiganensis subsp. michiganensis NCPPB 382 YP_001222283 Clavibacter michiganensis subsp. sepedonicus YP_001710473 Thermobifida fusca YX YP_288699 Streptomyces coelicolor A32 NP_628129 Streptomyces avermitilis MA-4680 NP_825437 Nocardioides sp. JS614 YP_922152 Propionibacterium acnes KPA171202 YP_054891 Kineococcus radiotolerans SRS30216 YP_001361392 Salinispora tropica CNB-440 YP_001159165 Salinispora arenicola CNS-205 YP_001537316 Saccharopolyspora erythraea NRRL 2338 YP_001102421 Renibacterium salmoninarum ATCC 33209 YP_001625560 Arthrobacter sp. FB24 YP_831116 Arthrobacter aurescens TC1 YP_947528 Nocardia farcinica IFM 10152 YP_116794 Rhodococcus sp. RHA1 YP_704790 Mycobacterium abscessus YP_001703364 Corynebacterium diphtheriae NCTC 13129 NP_940235 Corynebacterium urealyticum DSM 7109 YP_001799459 Corynebacterium efficiens YS-314 NP_737863 Corynebacterium glutamicum R YP_001138114 Corynebacterium glutamicum ATCC 13032 NP_600377 Corynebacterium glutamicum ATCC 13032 YP_225441 Mycobacterium vanbaalenii PYR-1 YP_953643 Mycobacterium gilvum PYR-GCK YP_001134847 Mycobacterium sp. JLS YP_001071322 Mycobacterium sp. MCS YP_640199 Mycobacterium sp. KMS YP_939079 Mycobacterium smegmatis str. MC2 155 YP_887546 Mycobacterium avium subsp. paratuberculosis K-10 NP_960250 Mycobacterium avium 104 YP_882347 Mycobacterium bovis BCG str. Pasteur 1173P2 YP_977753 Mycobacterium tuberculosis H37Ra YP_001282941 Mycobacterium tuberculosis F11 YP_001287584 Mycobacterium bovis AF2122 97 NP_855302 Mycobacterium tuberculosis H37Rv YP_177824 Mycobacterium tuberculosis CDC1551 NP_336115 Desulfotalea psychrophila LSv54 YP_064662 Porphyromonas gingivalis W83 NP_905143 Parabacteroides distasonis ATCC 8503 YP_001303989 Bacteroides vulgatus ATCC 8482 YP_001300067 Bacteroides thetaiotaomicron VPI-5482 NP_810123 Bacteroides fragilis YCH46 YP_099157 Bacteroides fragilis NCTC 9343 YP_211570 Nitratiruptor sp. SB155-2 YP_001355620 Arcobacter butzleri RM4018 YP_001490018 Campylobacter curvus 525.92 YP_001409213 Campylobacter concisus 13826 YP_001467777 Campylobacter hominis ATCC BAA-381 YP_001406208 Wolinella succinogenes DSM 1740 NP_907966 Helicobacter hepaticus ATCC 51449 NP_860634 Campylobacter jejuni RM1221 YP_178101 Campylobacter jejuni subsp. jejuni 81-176 YP_999807 Campylobacter jejuni subsp. jejuni NCTC 11168 NP_281294 Campylobacter jejuni subsp. jejuni 81116 YP_001481651 Campylobacter jejuni subsp. doylei 269.97 YP_001397340 Acidiphilium cryptum JF-5 YP_001234760 Coxiella burnetii RSA 331 YP_001596164 Coxiella burnetii Dugway 5J108-111 YP_001425202 Coxiella burnetii RSA 493 NP_819263 Francisella philomiragia subsp. philomiragia ATCC 25017 YP_001677353 Francisella tularensis subsp. holarctica YP_512984 Francisella tularensis subsp. holarctica OSU18 YP_762850 Francisella tularensis subsp. holarctica FTA YP_001427637 Francisella tularensis subsp. tularensis SCHU S4 YP_169329 Francisella tularensis subsp. tularensis FSC198 YP_666461 Francisella tularensis subsp. tularensis WY96-3418 YP_001122598 Francisella tularensis subsp. novicida U112 YP_897857 Coxiella burnetii RSA 493 NP_819973 Coxiella burnetii RSA 331 YP_001596747 Coxiella burnetii Dugway 5J108-111 YP_001424453 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_095233 Legionella pneumophila str. Lens YP_126561 Legionella pneumophila str. Paris YP_123528 Legionella pneumophila str. Corby YP_001249996 Xanthomonas campestris pv. campestris str. ATCC 33913 NP_637588 Xanthomonas campestris pv. campestris str. 8004 YP_242968 Xanthomonas axonopodis pv. citri str. 306 NP_642653 Xanthomonas campestris pv. vesicatoria str. 85-10 YP_364266 Bordetella petrii DSM 12804 YP_001629059 Bordetella pertussis Tohama I NP_879142 Bordetella bronchiseptica RB50 NP_891032 Bordetella parapertussis 12822 NP_886170 Methylobacterium extorquens PA1 YP_001638832 Hyphomonas neptunium ATCC 15444 YP_760367 Sphingomonas wittichii RW1 YP_001264219 Caulobacter crescentus CB15 NP_419579 Caulobacter sp. K31 YP_001682265 Delftia acidovorans SPH-1 YP_001563420 Herminiimonas arsenicoxydans YP_001099673 Janthinobacterium sp. Marseille YP_001353704 Azorhizobium caulinodans ORS 571 YP_001523500 Rhizobium leguminosarum bv. viciae 3841 YP_765564 Agrobacterium tumefaciens str. C58 NP_356555 Ochrobactrum anthropi ATCC 49188 YP_001372076 Brucella suis ATCC 23445 YP_001622325 Brucella canis ATCC 23365 YP_001594460 Brucella abortus biovar 1 str. 9-941 YP_223479 Brucella suis 1330 NP_699697 Brucella melitensis biovar Abortus 2308 YP_418900 Brucella melitensis 16M NP_541738 Brucella ovis ATCC 25840 YP_001257479 Dichelobacter nodosus VCS1703A YP_001209030 Psychrobacter sp. PRwf-1 YP_001279232 Rhodoferax ferrireducens T118 YP_523610 Azoarcus sp. BH72 YP_932736 Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_856176 Aeromonas salmonicida subsp. salmonicida A449 YP_001142488 Burkholderia xenovorans LB400 YP_556904 Burkholderia xenovorans LB400 YP_559109 Burkholderia multivorans ATCC 17616 YP_001578676 Burkholderia cenocepacia AU 1054 YP_622077 Burkholderia cenocepacia HI2424 YP_836460 Burkholderia cenocepacia MC0-3 YP_001766109 Burkholderia vietnamiensis G4 YP_001120748 Burkholderia sp. 383 YP_370385 Burkholderia ambifaria AMMD YP_774767 Burkholderia ambifaria MC40-6 YP_001809428 Burkholderia thailandensis E264 YP_441012 Burkholderia mallei NCTC 10229 YP_001027424 Burkholderia pseudomallei 668 YP_001057598 Burkholderia mallei SAVP1 YP_991499 Burkholderia mallei NCTC 10247 YP_001082389 Burkholderia pseudomallei 1106a YP_001064844 Burkholderia pseudomallei 1710b YP_332143 Burkholderia pseudomallei K96243 YP_107128 Burkholderia mallei ATCC 23344 YP_104657 Methylococcus capsulatus str. Bath YP_113575 Marinomonas sp. MWYL1 YP_001340368 Pseudomonas stutzeri A1501 YP_001171817 Acinetobacter sp. ADP1 YP_046898 Acinetobacter baumannii SDF YP_001707382 Acinetobacter baumannii ATCC 17978 YP_001084953 Acinetobacter baumannii AYE YP_001713530 Rhodopseudomonas palustris HaA2 YP_484550 Colwellia psychrerythraea 34H YP_268606 Pseudoalteromonas haloplanktis TAC125 YP_340517 Pseudoalteromonas atlantica T6c YP_661029 Psychromonas ingrahamii 37 YP_942171 Shewanella frigidimarina NCIMB 400 YP_749833 Shewanella denitrificans OS217 YP_562283 Shewanella amazonensis SB2B YP_928224 Shewanella loihica PV-4 YP_001093431 Shewanella sediminis HAW-EB3 YP_001474850 Shewanella woodyi ATCC 51908 YP_001759946 Shewanella pealeana ATCC 700345 YP_001501180 Shewanella halifaxensis HAW-EB4 YP_001673607 Shewanella baltica OS155 YP_001051330 Shewanella baltica OS195 YP_001555559 Shewanella baltica OS185 YP_001367187 Shewanella sp. W3-18-1 YP_962763 Shewanella putrefaciens CN-32 YP_001184161 Shewanella oneidensis MR-1 NP_718840 Shewanella sp. ANA-3 YP_868882 Shewanella sp. MR-4 YP_733376 Shewanella sp. MR-7 YP_737366 Haemophilus ducreyi 35000HP_NP_874145 Actinobacillus pleuropneumoniae L20 YP_001053006 Actinobacillus pleuropneumoniae serovar 3 str. JL03 YP_001651345 Pasteurella multocida subsp. multocida str. Pm70 NP_245911 Haemophilus somnus 129PT YP_718464 Haemophilus somnus 2336 YP_001783482 Mannheimia succiniciproducens MBEL55E YP_087907 Actinobacillus succinogenes 130Z YP_001345083 Haemophilus influenzae 86-028NP_YP_248744 Haemophilus influenzae Rd KW20 NP_439232 Haemophilus influenzae PittGG YP_001292989 Haemophilus influenzae PittEE YP_001291064 Escherichia coli UTI89 YP_540061 Escherichia coli APEC O1 YP_852100 Salmonella enterica subsp. arizonae serovar 62 YP_001570193 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_150363 Salmonella typhimurium LT2 NP_460748 Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_456301 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001587668 Shigella sonnei Ss046 YP_309953 Escherichia coli CFT073 NP_753044 Shigella dysenteriae Sd197 YP_402616 Escherichia coli str. K-12 substr. MG1655 NP_415497 Escherichia coli str. K12 substr. W3110 AP_001607 Escherichia coli DH10B YP_001729955 Escherichia coli HS YP_001457815 Escherichia coli E24377A YP_001462209 Escherichia coli 536 YP_668897 Shigella flexneri 5 str. 8401 YP_688512 Shigella flexneri 2a str. 2457T NP_836687 Escherichia coli O157 H7 str. Sakai NP_309161 Escherichia coli O157 H7 EDL933 NP_286915 Shigella flexneri 2a str. 301 NP_706901 Escherichia coli SECEC SMS-3-5 YP_001744190 Shigella boydii Sb227 YP_408646 Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_858102 Aeromonas salmonicida subsp. salmonicida A449 YP_001140647 Photobacterium profundum SS9 YP_130739 Vibrio fischeri ES114 YP_204336 Vibrio cholerae O1 biovar eltor str. N16961 NP_231478 Vibrio cholerae O395 YP_001217378 Vibrio vulnificus CMCP6 NP_761020 Vibrio vulnificus YJ016 NP_935076 Vibrio cholerae O1 biovar eltor str. N16961 NP_233258 Vibrio cholerae O395 YP_001215206 Vibrio parahaemolyticus RIMD 2210633 NP_797432 Vibrio harveyi ATCC BAA-1116 YP_001444799 Yersinia enterocolitica subsp. enterocolitica 8081 YP_001007127 Yersinia pestis CO92 NP_404730 Yersinia pestis KIM NP_670362 Yersinia pseudotuberculosis IP_32953 YP_069686 Yersinia pestis biovar Microtus str. 91001 NP_992412 Yersinia pestis Antiqua YP_650508 Yersinia pestis Nepal516 YP_648808 Yersinia pestis Pestoides F YP_001163920 Yersinia pseudotuberculosis IP_31758 YP_001401839 Yersinia pestis Angola YP_001605914 Yersinia pseudotuberculosis YPIII YP_001721691 Photorhabdus luminescens subsp. laumondii TTO1 NP_928745 Serratia proteamaculans 568 YP_001477503 Pectobacterium atrosepticum SCRI1043 YP_051089 Pectobacterium atrosepticum SCRI1043 YP_049471 Sodalis glossinidius str. morsitans YP_454560 Enterobacter sakazakii ATCC BAA-894 YP_001438690 Enterobacter sp. 638 YP_001175962 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334409 Citrobacter koseri ATCC BAA-895 YP_001453963 Salmonella enterica subsp. arizonae serovar 62 YP_001571210 Salmonella typhimurium LT2 NP_459725 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001588992 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151218 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215731 Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_455296 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_805890 Escherichia coli str. K12 substr. W3110 AP_001370 Shigella flexneri 2a str. 2457T NP_836275 Escherichia coli str. K-12 substr. MG1655 NP_415261 Escherichia coli UTI89 YP_539751 Shigella boydii Sb227 YP_407107 Escherichia coli O157 H7 str. Sakai NP_308795 Escherichia coli CFT073 NP_752741 Escherichia coli DH10B YP_001729719 Escherichia coli E24377A YP_001461893 Shigella sonnei Ss046 YP_309676 Escherichia coli 536 YP_668668 Shigella dysenteriae Sd197 YP_402357 Shigella flexneri 2a str. 301 NP_706501 Escherichia coli HS YP_001457533 Escherichia coli O157 H7 EDL933 NP_286461 Escherichia coli APEC O1 YP_851837 Escherichia coli SECEC SMS-3-5 YP_001742843 Shigella flexneri 5 str. 8401 YP_688161 0.1 734 133 68 70 1000 1000 978 1000 1000 937 982 1000 991 987 506 510 992 756 1000 874 1000 983 647 55 137 733 32 997 577 936 1000 415 1000 1000 999 1000 862 1000 991 637 987 1000 994 724 1000 791 156 345 540 255 77 169 58 62 41 66 674 1000 491 781 1000 992 548 996 1000 1000 858 1000 1000 844 1000 687 716 887 1000 720 779 459 827 1000 1000 837 363 1000 913 807 1000 270 802 1000 910 304 572 1000 974 426 996 1000 1000 123 953 675 445 1000 760 529 893 691 107 294 1000 233 910 595 1000 995 664 649 1000 1000 1000 346 250 1000 1000 780 1000 549 999 1000 450 1000 988 998 1000 346 1000 1000 896 947 831 659 838 444 683 852 1000 381 973 993 958 482 1000 998 540 760 1000 523 1000 981 797 850 810 960 1000 680 497 1000 580 1000 1000 895 790 113 42 288 143 81 47 155 749 1000 978 658 751 821 923 697 831 982 1000 788 321 670 545 746 456 838 775 535 535 758 593 575 991 976 998 921 793 537 996 734 486 41 4 1 7 899 689 422 136 182 71 84 122 752 449 623 374 770 412 488 924 180 838 1000 1000 1000 184 112 113 920 723 419 294 9 751 1000 449 628 739 668 802 996 543 1000 961 880 502 319 768 363 71 279 326 924 649 696 428 998 1000 309 607 686 658 706 553 946 1000 273 362 827 589 432 572 124 536 772 785 1000 829 970 966 1000 622 853 738 108 1000 861 1000 807 569 908 997 444 992 682 929 1000 946 1000 787 829 1000 711 123 918 492 551 344 993 1000 846 712 488 894 979 630 1000 506 972 1000 1000 1000 421 968 922 696 293 618 591 737 530 1000 522 333 1000 867 506 1000 559 760 1000 259 426 493 1000 661 684 800 519 726 660 999 1000 1000 362 1000 314 181 246 1000 1000 993 909 940 1000 880 1000 813 245 308 959 819 1000 1000 1000 755 778 537 1000 661 919 973 1000 732 160 72 629 849 526 284 450 629 812 344 792 1000 997 810 604 1000 536 1000 672 318 150 1000 956 550 468 752 386 537 1000 672 1000 445 731 730 932 975 1000 924 563 1000 961 546 1000 974 1000 1000 1000 654 1000 1000 792 999 718 994 498 849 586 645 308 222 263 211 242 1000 996 412 648 988 434 737 940 589 712 957 1000 1000 738 711 500 438 223 880 752 492 508 789 597 527 975 808 273 766 999 502 148 869 999 999 992 804 1000 893 558 893 630 966 711 548 496 1000 1000 554 997 849 375 434 175 354 999 336 1000 1000 1000 700 542 824 1000 496 695 873 999 651 345 347 995 997 92 321 642 79 42 46 52 30 25 22 76 118 34 485 399 1000 691 95 1000 1000 1000 1000 853 286 414 635 925 924 812 823 851 963 907 832 812 999 870 496 381 661 716 534 949 362 329 230 931 867 640 85 92 25 16 65 135 221 313 980 789 982 439 221 993 475 196 166 93 468 258 487 845 542 941 879 875 597 436 621 348 822 518 Euryarchaeota (Halobacteriales) Actinobacteria Chloroflexi Firmicute Bacteroidetes/Chlorobi Delta-Proteobacteria Firmicutes Euryarchaota (Thermoplasmatales) Cyanobacteria Delta-Proteobacteria Beta-Proteobacteria Alpha-Proteobacteria Beta-Proteobacteria Gamma-Proteobacteria Alpha-proteobacteria Beta-Proteobacteria Gamma-Proteobacteria Epsilon-Proteobacteria Bacteroidetes Actinobacteria Firmicutes Bacteroidetes/Chlorobi Euryarchaeota (Methanosarcinales) Chloroflexi Deinococcus/Thermus Delta-Proteobacteria Firmicutes Aquificales PVC Delta-Proteobacteria Bacteroidetes/Chlorobi Acidobacteria Suppl. Mat. 2

description

Halobacterium sp. NRC-1 NP_045984. Halobacterium sp. NRC-1 NP_046115. Halobacterium sp. NRC-1 NP_395927. Halobacterium sp. NRC-1 NP_395611. Halobacterium salinarum R1 YP_001690410. Halobacterium salinarum R1 YP_001690911. Saccharopolyspora erythraea NRRL 2338 YP_001105158. - PowerPoint PPT Presentation

Transcript of Halobacterium sp. NRC-1 NP_045984

Page 1: Halobacterium sp. NRC-1 NP_045984

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Halobacterium sp. NRC-1 NP_045984Halobacterium sp. NRC-1 NP_046115

Halobacterium sp. NRC-1 NP_395927

Halobacterium sp. NRC-1 NP_395611

Halobacterium salinarum R1 YP_001690410

Halobacterium salinarum R1 YP_001690911

Saccharopolyspora erythraea NRRL 2338 YP_001105158

Nocardia farcinica IFM 10152 YP_117796

Mycobacterium smegmatis str. MC2 155 YP_889839Frankia sp. EAN1pec YP_001510823

Frankia sp. CcI3 YP_479373

Frankia alni ACN14a YP_710879

Herpetosiphon aurantiacus ATCC 23779 YP_001545011

Symbiobacterium thermophilum IAM 14863 YP_075521

Gramella forsetii KT0803 YP_861002

Anaeromyxobacter dehalogenans 2CP-C YP_464151

Anaeromyxobacter sp. Fw109-5 YP_001378174

Myxococcus xanthus DK 1622 YP_635027

Sorangium cellulosum So ce 56 YP_001613076

Bacillus subtilis subsp. subtilis str. 168 NP_390949

Bacillus amyloliquefaciens FZB42 YP_001422361

Bacillus pumilus SAFR-032 YP_001487928

Bacillus licheniformis ATCC 14580 YP_080351

Bacillus licheniformis ATCC 14580 YP_092768

Bacillus halodurans C-125 NP_241744

Bacillus clausii KSM-K16 YP_174786

Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001376946

Bacillus cereus ATCC 14579 NP_834887

Bacillus weihenstephanensis KBAB4 YP_001647789

Bacillus thuringiensis serovar konkukian str. 97-27 YP_039214

Bacillus anthracis str. Ames NP_847628

Bacillus thuringiensis str. Al Hakam YP_897414

Bacillus anthracis str. Sterne YP_031312

Bacillus anthracis str. Ames Ancestor YP_022123

Bacillus cereus E33L YP_086487

Bacillus cereus ATCC 10987 NP_981630

Picrophilus torridus DSM 9790 YP_023387

Picrophilus torridus DSM 9790 YP_023642

Thermoplasma volcanium GSS1 NP_110602

Thermoplasma acidophilum DSM 1728 NP_394935

Thermoplasma acidophilum DSM 1728 NP_394452

Thermoplasma volcanium GSS1 NP_111251

Exiguobacterium sibiricum 255-15 YP_001814487

Lysinibacillus sphaericus C3-41 YP_001695995Bacillus halodurans C-125 NP_244843

Oceanobacillus iheyensis HTE831 NP_691971

Geobacillus kaustophilus HTA426 YP_147937

Geobacillus kaustophilus HTA426 YP_146457

Geobacillus thermodenitrificans NG80-2 YP_001124645

Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 YP_301795

Staphylococcus epidermidis ATCC 12228 NP_764339

Staphylococcus epidermidis RP62A YP_188257Staphylococcus haemolyticus JCSC1435 YP_253784

Staphylococcus aureus subsp. aureus MRSA252 YP_040473

Staphylococcus aureus subsp. aureus JH1 YP_001316309

Staphylococcus aureus subsp. aureus str. Newman YP_001331986

Staphylococcus aureus subsp. aureus Mu3 YP_001441668

Staphylococcus aureus subsp. aureus USA300 YP_493684

Staphylococcus aureus subsp. aureus N315 NP_374205

Staphylococcus aureus subsp. aureus JH9 YP_001246522

Staphylococcus aureus subsp. aureus USA300 TCH1516 YP_001574927

Staphylococcus aureus subsp. aureus NCTC 8325 YP_499580

Staphylococcus aureus subsp. aureus MSSA476 YP_043145

Staphylococcus aureus subsp. aureus COL YP_185958

Staphylococcus aureus subsp. aureus Mu50 NP_371610

Staphylococcus aureus subsp. aureus MW2 NP_645785

Staphylococcus aureus RF122 YP_416437

Burkholderia vietnamiensis G4 YP_001116207

Syntrophobacter fumaroxidans MPOB YP_847118

Syntrophobacter fumaroxidans MPOB YP_847160

Anabaena variabilis ATCC 29413 YP_320073

Anabaena variabilis ATCC 29413 YP_324548

Synechococcus elongatus PCC 6301 YP_173035

Synechococcus elongatus PCC 7942 YP_400784

Gloeobacter violaceus PCC 7421 NP_924143

Cyanothece sp. ATCC 51142 YP_001804829

Anabaena variabilis ATCC 29413 YP_320076

Nostoc sp. PCC 7120 NP_488064

Anabaena variabilis ATCC 29413 YP_322192

Acaryochloris marina MBIC11017 YP_001520281

Synechocystis sp. PCC 6803 NP_440505

Thermosynechococcus elongatus BP-1 NP_682392

Synechococcus sp. JA-3-3Ab YP_475181

Synechococcus sp. JA-2-3Ba2-13 YP_477446

Bradyrhizobium japonicum USDA 110 NP_766923

Burkholderia multivorans ATCC 17616 YP_001585770

Azorhizobium caulinodans ORS 571 YP_001524270Methylobacterium radiotolerans JCM 2831 YP_001757504

Hahella chejuensis KCTC 2396 YP_432017

Marinomonas sp. MWYL1 YP_001342988

Francisella philomiragia subsp. philomiragia ATCC 25017 YP_001677725

Francisella tularensis subsp. novicida U112 YP_899232

Francisella tularensis subsp. holarctica FTA YP_001429301

Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_094253

Legionella pneumophila str. Paris YP_122602

Legionella pneumophila str. Corby YP_001249616

Legionella pneumophila str. Lens YP_125621

Rhodopseudomonas palustris HaA2 YP_483827

Parvibaculum lavamentivorans DS-1 YP_001411876

Alcanivorax borkumensis SK2 YP_694142

Colwellia psychrerythraea 34H YP_270499

Saccharophagus degradans 2-40 YP_526702

Vibrio cholerae O1 biovar eltor str. N16961 NP_231211

Vibrio cholerae O395 YP_001217121Methylibium petroleiphilum PM1 YP_001021761

Bradyrhizobium japonicum USDA 110 NP_770368

Bordetella petrii DSM 12804 YP_001629498

Bordetella parapertussis 12822 NP_885736

Bordetella bronchiseptica RB50 NP_890546

Bordetella pertussis Tohama I NP_881775

Chromobacterium violaceum ATCC 12472 NP_903328

Mesorhizobium loti MAFF303099 NP_105373

Jannaschia sp. CCS1 YP_508678

Dinoroseobacter shibae DFL 12 YP_001534022

Azoarcus sp. BH72 YP_933275

Ralstonia solanacearum GMI1000 NP_522803

Ralstonia metallidurans CH34 YP_587360

Polaromonas sp. JS666 YP_550908

Polaromonas naphthalenivorans CJ2 YP_980736

Halorhodospira halophila SL1 YP_001003985

Alkalilimnicola ehrlichei MLHE-1 YP_742877

Chromohalobacter salexigens DSM 3043 YP_574051

Marinobacter aquaeolei VT8 YP_958735

Mesorhizobium sp. BNC1 YP_676598

Xanthobacter autotrophicus Py2 YP_001416174

Ralstonia solanacearum GMI1000 NP_522768

Burkholderia vietnamiensis G4 YP_001115027

Burkholderia multivorans ATCC 17616 YP_001585473

Burkholderia pseudomallei 668 YP_001062961

Burkholderia pseudomallei 1106a YP_001075908

Burkholderia pseudomallei K96243 YP_111388

Methylobacterium extorquens PA1 YP_001639446

Methylobacterium sp. 4-46 YP_001768208

Xanthomonas campestris pv. campestris str. ATCC 33913 NP_638161

Xanthomonas campestris pv. campestris str. 8004 YP_242389

Xanthomonas axonopodis pv. citri str. 306 NP_643292

Xanthomonas campestris pv. vesicatoria str. 85-10 YP_364860

Xanthomonas oryzae pv. oryzae MAFF 311018 YP_450200

Xanthomonas oryzae pv. oryzae KACC10331 YP_199912Xanthomonas campestris pv. campestris str. ATCC 33913 NP_639037

Xanthomonas campestris pv. campestris str. 8004 YP_244822

Xanthomonas axonopodis pv. citri str. 306 NP_644042

Xanthomonas campestris pv. vesicatoria str. 85-10 YP_365585

Xanthomonas oryzae pv. oryzae KACC10331 YP_199278

Xanthomonas oryzae pv. oryzae MAFF 311018 YP_449618

Psychrobacter arcticus 273-4 YP_264797

Psychrobacter cryohalolentis K5 YP_580955Wolbachia endosymbiont of Drosophila melanogaster NP_966497

Rickettsia bellii RML369-C YP_537689

Rickettsia bellii OSU 85-389 YP_001496000

Rickettsia canadensis str. McKiel YP_001491977

Rickettsia felis URRWXCal2 YP_246349

Rickettsia akari str. Hartford YP_001493141

Rickettsia prowazekii str. Madrid E NP_220602

Rickettsia typhi str. Wilmington YP_067171

Rickettsia massiliae MTU5 YP_001499104

Rickettsia conorii str. Malish 7 NP_359925

Rickettsia rickettsii str. Sheila Smith YP_001494408

Rickettsia rickettsii str. Iowa YP_001649653

Idiomarina loihiensis L2TR YP_154434

Polynucleobacter sp. QLW-P1DMWA-1 YP_001156393

Granulibacter bethesdensis CGDNIH1 YP_743957

Zymomonas mobilis subsp. mobilis ZM4 YP_163306

Gluconobacter oxydans 621H YP_190717

Acidiphilium cryptum JF-5 YP_001235159

Enterobacter sakazakii ATCC BAA-894 YP_001439012

Xanthomonas campestris pv. campestris str. ATCC 33913 NP_638010

Xanthomonas campestris pv. campestris str. 8004 YP_242542

Nitrobacter hamburgensis X14 YP_571560

Methylobacterium extorquens PA1 YP_001641277

Methylobacterium radiotolerans JCM 2831 YP_001752902

Mesorhizobium sp. BNC1 YP_674974

Rhodospirillum rubrum ATCC 11170 YP_425651

Bradyrhizobium sp. ORS278 YP_001208645

Bradyrhizobium sp. BTAi1 YP_001236881

Rhodopseudomonas palustris BisB18 YP_529990

Rhodopseudomonas palustris BisA53 YP_779478

Rhodopseudomonas palustris CGA009 NP_950127

Rhodopseudomonas palustris HaA2 YP_488264

Rhodopseudomonas palustris BisB5 YP_571496

Methylobacterium sp. 4-46 YP_001771100

Methylobacterium radiotolerans JCM 2831 YP_001757570Paracoccus denitrificans PD1222 YP_917772

Sphingomonas wittichii RW1 YP_001260922

Novosphingobium aromaticivorans DSM 12444 YP_496304

Sinorhizobium meliloti 1021 NP_384665

Sinorhizobium medicae WSM419 YP_001325865

Psychromonas ingrahamii 37 YP_943166

Roseobacter denitrificans OCh 114 YP_681157

Rhodobacter sphaeroides ATCC 17025 YP_001170018

Rhodobacter sphaeroides 2.4.1 YP_354730

Rhodobacter sphaeroides ATCC 17029 YP_001045802

Acinetobacter sp. ADP1 YP_046412

Acinetobacter baumannii ATCC 17978 YP_001084464

Acinetobacter baumannii AYE YP_001714068

Burkholderia xenovorans LB400 YP_557210

Burkholderia multivorans ATCC 17616 YP_001585362

Burkholderia ambifaria AMMD YP_777566

Burkholderia ambifaria MC40-6 YP_001816424

Burkholderia sp. 383 YP_366247

Burkholderia sp. 383 YP_366658Burkholderia cenocepacia MC0-3 YP_001774662

Burkholderia cenocepacia AU 1054 YP_621301

Burkholderia cenocepacia HI2424 YP_840030

Burkholderia vietnamiensis G4 YP_001115242

Burkholderia xenovorans LB400 YP_553508

Burkholderia vietnamiensis G4 YP_001116102

Burkholderia multivorans ATCC 17616 YP_001583283

Burkholderia sp. 383 YP_370935

Burkholderia ambifaria AMMD YP_776701

Burkholderia ambifaria MC40-6 YP_001812025

Burkholderia cenocepacia AU 1054 YP_625229

Burkholderia cenocepacia HI2424 YP_839104

Burkholderia cenocepacia MC0-3 YP_001778411

Burkholderia thailandensis E264 YP_440336

Burkholderia pseudomallei 1710b YP_336927

Burkholderia mallei NCTC 10247 YP_001079272

Burkholderia mallei NCTC 10229 YP_001024930

Burkholderia pseudomallei 668 YP_001061434

Burkholderia mallei SAVP1 YP_990436

Burkholderia pseudomallei 1106a YP_001074378

Burkholderia pseudomallei K96243 YP_110254

Burkholderia mallei ATCC 23344 YP_106386

Marinomonas sp. MWYL1 YP_001341997

Ralstonia eutropha JMP134 YP_298301Ralstonia eutropha H16 YP_840979

Methylobacillus flagellatus KT YP_545052

Methylobacillus flagellatus KT YP_545196

Bordetella parapertussis 12822 NP_883344

Bordetella bronchiseptica RB50 NP_887784

Bordetella petrii DSM 12804 YP_001632445

Azoarcus sp. EbN1 YP_159652

Ralstonia metallidurans CH34 YP_587086

Ralstonia eutropha JMP134 YP_298481

Ralstonia eutropha H16 YP_840698

Pseudomonas putida GB-1 YP_001669500

Gluconacetobacter diazotrophicus PAl 5 YP_001600819

Azorhizobium caulinodans ORS 571 YP_001526675

Pseudomonas aeruginosa PA7 YP_001348478

Pseudomonas aeruginosa PA7 YP_001346562

Pseudomonas aeruginosa PAO1 NP_252619

Pseudomonas aeruginosa UCBPP-PA14 YP_789187Pseudomonas entomophila L48 YP_608020

Pseudomonas fluorescens Pf-5 YP_260833

Pseudomonas fluorescens PfO-1 YP_349115

Pseudomonas stutzeri A1501 YP_001172323

Pseudomonas mendocina ymP_YP_001186246

Pseudomonas fluorescens Pf-5 YP_262432Pseudomonas syringae pv. phaseolicola 1448A YP_276457

Pseudomonas syringae pv. syringae B728a YP_237350

Pseudomonas syringae pv. tomato str. DC3000 NP_794399

Pseudomonas fluorescens PfO-1 YP_350621

Pseudomonas entomophila L48 YP_610218

Pseudomonas putida W619 YP_001747661

Pseudomonas putida KT2440 NP_746760

Pseudomonas putida F1 YP_001269817

Pseudomonas putida GB-1 YP_001670867

Photorhabdus luminescens subsp. laumondii TTO1 NP_929304

Vibrio parahaemolyticus RIMD 2210633 NP_800647

Shewanella sp. MR-7 YP_737020

Shewanella sp. ANA-3 YP_868569

Shewanella baltica OS155 YP_001049308

Shewanella baltica OS185 YP_001367639

Shewanella baltica OS195 YP_001555995

Shewanella sp. W3-18-1 YP_964615

Shewanella putrefaciens CN-32 YP_001182458

Yersinia enterocolitica subsp. enterocolitica 8081 YP_001006678

Serratia proteamaculans 568 YP_001479088

Citrobacter koseri ATCC BAA-895 YP_001452803

Enterobacter sp. 638 YP_001176857

Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001335591

Enterobacter sakazakii ATCC BAA-894 YP_001438025

Enterobacter sp. 638 YP_001177845

Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334816

Salmonella enterica subsp. arizonae serovar 62 YP_001571562

Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_454955

Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_806232Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215388

Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001589431

Salmonella typhimurium LT2 NP_459355

Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151558

Flavobacterium johnsoniae UW101 YP_001197197

Acidobacteria bacterium Ellin345 YP_592327

Solibacter usitatus Ellin6076 YP_827888

Anaeromyxobacter sp. Fw109-5 YP_001378843

Rhodopirellula baltica SH 1 NP_869127

Candidatus Protochlamydia amoebophila UWE25 YP_008629

Chlamydia muridarum Nigg NP_296660

Chlamydia trachomatis D UW-3 CX NP_219515

Chlamydia trachomatis A HAR-13 YP_327811

Chlamydia trachomatis 434 Bu YP_001654352

Chlamydia trachomatis L2b UCH-1 proctitis YP_001653364

Chlamydophila abortus S26 3 YP_220039

Chlamydophila caviae GPIC NP_829534

Chlamydophila felis Fe C-56 YP_515258

Chlamydophila pneumoniae AR39 NP_445214

Chlamydophila pneumoniae TW-183 NP_876378

Chlamydophila pneumoniae CWL029 NP_224310

Chlamydophila pneumoniae J138 NP_300162

Anaeromyxobacter dehalogenans 2CP-C YP_466933

Heliobacterium modesticaldum Ice1 YP_001680379

Carboxydothermus hydrogenoformans Z-2901 YP_361239

Aquifex aeolicus VF5 NP_213934

Syntrophus aciditrophicus SB YP_461912

Pelobacter carbinolicus DSM 2380 YP_358496

Geobacter sulfurreducens PCA NP_952691

Geobacter metallireducens GS-15 YP_384884

Geobacter uraniireducens Rf4 YP_001230923

Pelobacter propionicus DSM 2379 YP_900848

Syntrophobacter fumaroxidans MPOB YP_844474

Desulfococcus oleovorans Hxd3 YP_001530529

Lawsonia intracellularis PHE MN1-00 YP_594652

Desulfovibrio desulfuricans G20 YP_389693

Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough YP_012481

Desulfovibrio vulgaris subsp. vulgaris DP4 YP_965569

Symbiobacterium thermophilum IAM 14863 YP_074471

Methanosarcina acetivorans C2A NP_615957

Methanosarcina barkeri str. Fusaro YP_303687

Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001376669

Bacillus thuringiensis serovar konkukian str. 97-27 YP_038840Bacillus cereus ATCC 10987 NP_981242

Bacillus cereus E33L YP_086122

Bacillus cereus ATCC 14579 NP_834494

Bacillus weihenstephanensis KBAB4 YP_001647411

Bacillus anthracis str. Ames NP_847241

Bacillus anthracis str. Sterne YP_030934

Bacillus anthracis str. Ames Ancestor YP_021698

Bacillus thuringiensis str. Al Hakam YP_897070

Moorella thermoacetica ATCC 39073 YP_430930

Desulfitobacterium hafniense Y51 YP_520289

Desulfotomaculum reducens MI-1 YP_001112992

Chlorobium tepidum TLS NP_662697

Chlorobium phaeobacteroides DSM 266 YP_911179

Pelodictyon luteolum DSM 273 YP_374406

Prosthecochloris vibrioformis DSM 265 YP_001130055

Listeria welshimeri serovar 6b str. SLCC5334 YP_850867

Listeria monocytogenes EGD-e NP_466240

Listeria innocua Clip11262 NP_472194

Listeria monocytogenes str. 4b F2365 YP_015286

Bacillus licheniformis ATCC 14580 YP_081211

Bacillus licheniformis ATCC 14580 YP_093640

Bacillus pumilus SAFR-032 YP_001488727

Bacillus subtilis subsp. subtilis str. 168 NP_391755

Bacillus amyloliquefaciens FZB42 YP_001423161

Bacillus weihenstephanensis KBAB4 YP_001644670

Bacillus cereus ATCC 14579 NP_831708

Bacillus cereus ATCC 10987 NP_978337

Bacillus thuringiensis str. Al Hakam YP_894553

Bacillus thuringiensis serovar konkukian str. 97-27 YP_036109

Bacillus cereus E33L YP_083355

Bacillus anthracis str. Sterne YP_028067

Bacillus anthracis str. Ames NP_844352

Bacillus anthracis str. Ames Ancestor YP_018587

Lactobacillus casei ATCC 334 YP_805320

Lactococcus lactis subsp. cremoris SK11 YP_808720Lactococcus lactis subsp. lactis Il1403 NP_266860

Lactococcus lactis subsp. cremoris MG1363 YP_001033135

Enterococcus faecalis V583 NP_815724

Lactobacillus salivarius UCC118 YP_535923

Lactobacillus reuteri F275 YP_001271110

Streptococcus agalactiae 2603V R NP_688732

Streptococcus agalactiae NEM316 NP_736221

Streptococcus agalactiae A909 YP_330350

Lactobacillus plantarum WCFS1 NP_784802

Lactobacillus brevis ATCC 367 YP_795748

Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 YP_818047

Leuconostoc citreum KM20 YP_001727748

Oenococcus oeni PSU-1 YP_811337

Lactobacillus casei ATCC 334 YP_807394

Lactobacillus johnsonii NCC 533 NP_965789

Lactobacillus gasseri ATCC 33323 YP_819534

Herpetosiphon aurantiacus ATCC 23779 YP_001546523Deinococcus geothermalis DSM 11300 YP_594212

Acidothermus cellulolyticus 11B YP_872359

Leifsonia xyli subsp. xyli str. CTCB07 YP_062182

Clavibacter michiganensis subsp. michiganensis NCPPB 382 YP_001222283

Clavibacter michiganensis subsp. sepedonicus YP_001710473

Thermobifida fusca YX YP_288699

Streptomyces coelicolor A32 NP_628129

Streptomyces avermitilis MA-4680 NP_825437

Nocardioides sp. JS614 YP_922152

Propionibacterium acnes KPA171202 YP_054891

Kineococcus radiotolerans SRS30216 YP_001361392

Salinispora tropica CNB-440 YP_001159165

Salinispora arenicola CNS-205 YP_001537316

Saccharopolyspora erythraea NRRL 2338 YP_001102421

Renibacterium salmoninarum ATCC 33209 YP_001625560

Arthrobacter sp. FB24 YP_831116

Arthrobacter aurescens TC1 YP_947528

Nocardia farcinica IFM 10152 YP_116794

Rhodococcus sp. RHA1 YP_704790

Mycobacterium abscessus YP_001703364

Corynebacterium diphtheriae NCTC 13129 NP_940235

Corynebacterium urealyticum DSM 7109 YP_001799459

Corynebacterium efficiens YS-314 NP_737863

Corynebacterium glutamicum R YP_001138114

Corynebacterium glutamicum ATCC 13032 NP_600377

Corynebacterium glutamicum ATCC 13032 YP_225441

Mycobacterium vanbaalenii PYR-1 YP_953643

Mycobacterium gilvum PYR-GCK YP_001134847

Mycobacterium sp. JLS YP_001071322

Mycobacterium sp. MCS YP_640199

Mycobacterium sp. KMS YP_939079

Mycobacterium smegmatis str. MC2 155 YP_887546

Mycobacterium avium subsp. paratuberculosis K-10 NP_960250

Mycobacterium avium 104 YP_882347

Mycobacterium bovis BCG str. Pasteur 1173P2 YP_977753Mycobacterium tuberculosis H37Ra YP_001282941

Mycobacterium tuberculosis F11 YP_001287584

Mycobacterium bovis AF2122 97 NP_855302

Mycobacterium tuberculosis H37Rv YP_177824

Mycobacterium tuberculosis CDC1551 NP_336115

Desulfotalea psychrophila LSv54 YP_064662

Porphyromonas gingivalis W83 NP_905143

Parabacteroides distasonis ATCC 8503 YP_001303989Bacteroides vulgatus ATCC 8482 YP_001300067

Bacteroides thetaiotaomicron VPI-5482 NP_810123

Bacteroides fragilis YCH46 YP_099157

Bacteroides fragilis NCTC 9343 YP_211570

Nitratiruptor sp. SB155-2 YP_001355620

Arcobacter butzleri RM4018 YP_001490018

Campylobacter curvus 525.92 YP_001409213

Campylobacter concisus 13826 YP_001467777

Campylobacter hominis ATCC BAA-381 YP_001406208

Wolinella succinogenes DSM 1740 NP_907966

Helicobacter hepaticus ATCC 51449 NP_860634

Campylobacter jejuni RM1221 YP_178101

Campylobacter jejuni subsp. jejuni 81-176 YP_999807

Campylobacter jejuni subsp. jejuni NCTC 11168 NP_281294

Campylobacter jejuni subsp. jejuni 81116 YP_001481651

Campylobacter jejuni subsp. doylei 269.97 YP_001397340

Acidiphilium cryptum JF-5 YP_001234760

Coxiella burnetii RSA 331 YP_001596164

Coxiella burnetii Dugway 5J108-111 YP_001425202

Coxiella burnetii RSA 493 NP_819263

Francisella philomiragia subsp. philomiragia ATCC 25017 YP_001677353

Francisella tularensis subsp. holarctica YP_512984

Francisella tularensis subsp. holarctica OSU18 YP_762850

Francisella tularensis subsp. holarctica FTA YP_001427637

Francisella tularensis subsp. tularensis SCHU S4 YP_169329

Francisella tularensis subsp. tularensis FSC198 YP_666461

Francisella tularensis subsp. tularensis WY96-3418 YP_001122598

Francisella tularensis subsp. novicida U112 YP_897857

Coxiella burnetii RSA 493 NP_819973

Coxiella burnetii RSA 331 YP_001596747

Coxiella burnetii Dugway 5J108-111 YP_001424453

Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_095233

Legionella pneumophila str. Lens YP_126561

Legionella pneumophila str. Paris YP_123528

Legionella pneumophila str. Corby YP_001249996Xanthomonas campestris pv. campestris str. ATCC 33913 NP_637588

Xanthomonas campestris pv. campestris str. 8004 YP_242968

Xanthomonas axonopodis pv. citri str. 306 NP_642653

Xanthomonas campestris pv. vesicatoria str. 85-10 YP_364266

Bordetella petrii DSM 12804 YP_001629059

Bordetella pertussis Tohama I NP_879142

Bordetella bronchiseptica RB50 NP_891032

Bordetella parapertussis 12822 NP_886170Methylobacterium extorquens PA1 YP_001638832

Hyphomonas neptunium ATCC 15444 YP_760367

Sphingomonas wittichii RW1 YP_001264219

Caulobacter crescentus CB15 NP_419579

Caulobacter sp. K31 YP_001682265

Delftia acidovorans SPH-1 YP_001563420

Herminiimonas arsenicoxydans YP_001099673

Janthinobacterium sp. Marseille YP_001353704

Azorhizobium caulinodans ORS 571 YP_001523500

Rhizobium leguminosarum bv. viciae 3841 YP_765564

Agrobacterium tumefaciens str. C58 NP_356555

Ochrobactrum anthropi ATCC 49188 YP_001372076

Brucella suis ATCC 23445 YP_001622325

Brucella canis ATCC 23365 YP_001594460

Brucella abortus biovar 1 str. 9-941 YP_223479

Brucella suis 1330 NP_699697

Brucella melitensis biovar Abortus 2308 YP_418900

Brucella melitensis 16M NP_541738

Brucella ovis ATCC 25840 YP_001257479

Dichelobacter nodosus VCS1703A YP_001209030

Psychrobacter sp. PRwf-1 YP_001279232

Rhodoferax ferrireducens T118 YP_523610

Azoarcus sp. BH72 YP_932736

Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_856176

Aeromonas salmonicida subsp. salmonicida A449 YP_001142488

Burkholderia xenovorans LB400 YP_556904

Burkholderia xenovorans LB400 YP_559109

Burkholderia multivorans ATCC 17616 YP_001578676

Burkholderia cenocepacia AU 1054 YP_622077

Burkholderia cenocepacia HI2424 YP_836460

Burkholderia cenocepacia MC0-3 YP_001766109

Burkholderia vietnamiensis G4 YP_001120748

Burkholderia sp. 383 YP_370385

Burkholderia ambifaria AMMD YP_774767

Burkholderia ambifaria MC40-6 YP_001809428Burkholderia thailandensis E264 YP_441012

Burkholderia mallei NCTC 10229 YP_001027424

Burkholderia pseudomallei 668 YP_001057598

Burkholderia mallei SAVP1 YP_991499

Burkholderia mallei NCTC 10247 YP_001082389

Burkholderia pseudomallei 1106a YP_001064844

Burkholderia pseudomallei 1710b YP_332143

Burkholderia pseudomallei K96243 YP_107128

Burkholderia mallei ATCC 23344 YP_104657Methylococcus capsulatus str. Bath YP_113575

Marinomonas sp. MWYL1 YP_001340368

Pseudomonas stutzeri A1501 YP_001171817

Acinetobacter sp. ADP1 YP_046898

Acinetobacter baumannii SDF YP_001707382

Acinetobacter baumannii ATCC 17978 YP_001084953

Acinetobacter baumannii AYE YP_001713530

Rhodopseudomonas palustris HaA2 YP_484550Colwellia psychrerythraea 34H YP_268606

Pseudoalteromonas haloplanktis TAC125 YP_340517

Pseudoalteromonas atlantica T6c YP_661029

Psychromonas ingrahamii 37 YP_942171

Shewanella frigidimarina NCIMB 400 YP_749833

Shewanella denitrificans OS217 YP_562283

Shewanella amazonensis SB2B YP_928224

Shewanella loihica PV-4 YP_001093431

Shewanella sediminis HAW-EB3 YP_001474850

Shewanella woodyi ATCC 51908 YP_001759946

Shewanella pealeana ATCC 700345 YP_001501180

Shewanella halifaxensis HAW-EB4 YP_001673607

Shewanella baltica OS155 YP_001051330

Shewanella baltica OS195 YP_001555559

Shewanella baltica OS185 YP_001367187

Shewanella sp. W3-18-1 YP_962763

Shewanella putrefaciens CN-32 YP_001184161

Shewanella oneidensis MR-1 NP_718840

Shewanella sp. ANA-3 YP_868882

Shewanella sp. MR-4 YP_733376

Shewanella sp. MR-7 YP_737366

Haemophilus ducreyi 35000HP_NP_874145

Actinobacillus pleuropneumoniae L20 YP_001053006

Actinobacillus pleuropneumoniae serovar 3 str. JL03 YP_001651345

Pasteurella multocida subsp. multocida str. Pm70 NP_245911

Haemophilus somnus 129PT YP_718464

Haemophilus somnus 2336 YP_001783482

Mannheimia succiniciproducens MBEL55E YP_087907

Actinobacillus succinogenes 130Z YP_001345083

Haemophilus influenzae 86-028NP_YP_248744

Haemophilus influenzae Rd KW20 NP_439232

Haemophilus influenzae PittGG YP_001292989

Haemophilus influenzae PittEE YP_001291064

Escherichia coli UTI89 YP_540061

Escherichia coli APEC O1 YP_852100Salmonella enterica subsp. arizonae serovar 62 YP_001570193

Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_150363

Salmonella typhimurium LT2 NP_460748

Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_456301

Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001587668

Shigella sonnei Ss046 YP_309953

Escherichia coli CFT073 NP_753044

Shigella dysenteriae Sd197 YP_402616Escherichia coli str. K-12 substr. MG1655 NP_415497

Escherichia coli str. K12 substr. W3110 AP_001607

Escherichia coli DH10B YP_001729955

Escherichia coli HS YP_001457815

Escherichia coli E24377A YP_001462209

Escherichia coli 536 YP_668897

Shigella flexneri 5 str. 8401 YP_688512

Shigella flexneri 2a str. 2457T NP_836687

Escherichia coli O157 H7 str. Sakai NP_309161

Escherichia coli O157 H7 EDL933 NP_286915

Shigella flexneri 2a str. 301 NP_706901

Escherichia coli SECEC SMS-3-5 YP_001744190

Shigella boydii Sb227 YP_408646

Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_858102

Aeromonas salmonicida subsp. salmonicida A449 YP_001140647

Photobacterium profundum SS9 YP_130739

Vibrio fischeri ES114 YP_204336

Vibrio cholerae O1 biovar eltor str. N16961 NP_231478

Vibrio cholerae O395 YP_001217378

Vibrio vulnificus CMCP6 NP_761020

Vibrio vulnificus YJ016 NP_935076

Vibrio cholerae O1 biovar eltor str. N16961 NP_233258

Vibrio cholerae O395 YP_001215206

Vibrio parahaemolyticus RIMD 2210633 NP_797432

Vibrio harveyi ATCC BAA-1116 YP_001444799

Yersinia enterocolitica subsp. enterocolitica 8081 YP_001007127

Yersinia pestis CO92 NP_404730

Yersinia pestis KIM NP_670362Yersinia pseudotuberculosis IP_32953 YP_069686

Yersinia pestis biovar Microtus str. 91001 NP_992412

Yersinia pestis Antiqua YP_650508

Yersinia pestis Nepal516 YP_648808

Yersinia pestis Pestoides F YP_001163920

Yersinia pseudotuberculosis IP_31758 YP_001401839

Yersinia pestis Angola YP_001605914Yersinia pseudotuberculosis YPIII YP_001721691Photorhabdus luminescens subsp. laumondii TTO1 NP_928745

Serratia proteamaculans 568 YP_001477503

Pectobacterium atrosepticum SCRI1043 YP_051089

Pectobacterium atrosepticum SCRI1043 YP_049471

Sodalis glossinidius str. morsitans YP_454560

Enterobacter sakazakii ATCC BAA-894 YP_001438690

Enterobacter sp. 638 YP_001175962

Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334409

Citrobacter koseri ATCC BAA-895 YP_001453963

Salmonella enterica subsp. arizonae serovar 62 YP_001571210

Salmonella typhimurium LT2 NP_459725

Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001588992

Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151218

Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215731

Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_455296

Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_805890

Escherichia coli str. K12 substr. W3110 AP_001370

Shigella flexneri 2a str. 2457T NP_836275

Escherichia coli str. K-12 substr. MG1655 NP_415261

Escherichia coli UTI89 YP_539751

Shigella boydii Sb227 YP_407107

Escherichia coli O157 H7 str. Sakai NP_308795

Escherichia coli CFT073 NP_752741

Escherichia coli DH10B YP_001729719

Escherichia coli E24377A YP_001461893

Shigella sonnei Ss046 YP_309676

Escherichia coli 536 YP_668668

Shigella dysenteriae Sd197 YP_402357

Shigella flexneri 2a str. 301 NP_706501

Escherichia coli HS YP_001457533

Escherichia coli O157 H7 EDL933 NP_286461

Escherichia coli APEC O1 YP_851837

Escherichia coli SECEC SMS-3-5 YP_001742843

Shigella flexneri 5 str. 8401 YP_688161

0.1

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527

975

808

273

766

999

502

148

869999999

992804

1000893

558

893

630

966711

548

4961000

1000

554997849

375

434

175

354

999

336

10001000

1000

700

5428241000

496

695

873

999

651

345347995997

92

321642

7942465230252276118

34

485

399

1000

691

95

1000

1000

1000

1000

853286

414

635

925

924

812

823

851

963907

832

812

999

870

496381661

716534

949362329230931867640

85

9225

16

65135

221313980

789

982

439

221

993

475

196

166

93

468

258

487

845

542

941

879

875

597

436

621

348

822

518

Euryarchaeota (Halobacteriales)

ActinobacteriaChloroflexiFirmicuteBacteroidetes/ChlorobiDelta-Proteobacteria

FirmicutesEuryarchaota (Thermoplasmatales)

Cyanobacteria

Delta-ProteobacteriaBeta-Proteobacteria

Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria

Alpha-proteobacteriaBeta-ProteobacteriaGamma-Proteobacteria

Epsilon-Proteobacteria

Bacteroidetes

Actinobacteria

FirmicutesBacteroidetes/ChlorobiEuryarchaeota (Methanosarcinales)

ChloroflexiDeinococcus/Thermus

Delta-Proteobacteria

FirmicutesAquificales

PVCDelta-Proteobacteria

Bacteroidetes/ChlorobiAcidobacteria

Suppl. Mat. 2

Page 2: Halobacterium sp. NRC-1 NP_045984

0.1

Symbiobacterium thermophilum IAM 14863 YP_076979Solibacter usitatus Ellin6076 YP_824765

Candidatus Protochlamydia amoebophila UWE25 YP_008977Gramella forsetii KT0803 YP_861439Flavobacterium psychrophilum JIP02 86 YP_001295831

Methylobacillus flagellatus KT YP_545543Salinibacter ruber DSM 13855 YP_444468

Ralstonia metallidurans CH34 YP_584521Burkholderia thailandensis E264 YP_439812Burkholderia ambifaria MC40-6 YP_001811293

Azoarcus sp. EbN1 YP_158648Ralstonia solanacearum GMI1000 NP_522554Ralstonia metallidurans CH34 YP_586456Polaromonas sp. JS666 YP_548116

Nitrosomonas eutropha C91 YP_747791Rhodoferax ferrireducens T118 YP_525356

Synechococcus elongatus PCC 7942 YP_399221Synechococcus elongatus PCC 6301 YP_172019

Chlorobium chlorochromatii CaD3 YP_379659Anaeromyxobacter dehalogenans 2CP-C YP_464382Anaeromyxobacter sp. Fw109-5 YP_001378410

Helicobacter hepaticus ATCC 51449 NP_860787Wolinella succinogenes DSM 1740 NP_906440Helicobacter acinonychis str. Sheeba YP_664165Helicobacter pylori J99 NP_222853Helicobacter pylori 26695 NP_206943Helicobacter pylori HPAG1 YP_626883

Sulfurimonas denitrificans DSM 1251 YP_392597Arcobacter butzleri RM4018 YP_001490968Nitratiruptor sp. SB155-2 YP_001357081Sulfurovum sp. NBC37-1 YP_001357495

Campylobacter hominis ATCC BAA-381 YP_001406948Campylobacter fetus subsp. fetus 82-40 YP_891580

Campylobacter curvus 525.92 YP_001407573Campylobacter jejuni subsp. doylei 269.97 YP_001398790Campylobacter jejuni subsp. jejuni 81-176 YP_001001138Campylobacter jejuni subsp. jejuni 81116 YP_001482970Campylobacter jejuni RM1221 YP_179644Campylobacter jejuni subsp. jejuni NCTC 11168 NP_282628

Leptospira borgpetersenii serovar Hardjo-bovis L550 YP_798081Leptospira borgpetersenii serovar Hardjo-bovis JB197 YP_800805

Bdellovibrio bacteriovorus HD100 NP_969411Myxococcus xanthus DK 1622 YP_633680Rhodopirellula baltica SH 1 NP_867199Cytophaga hutchinsonii ATCC 33406 YP_677753

Candidatus Sulcia muelleri GWSS YP_001597952Gramella forsetii KT0803 YP_861474Flavobacterium johnsoniae UW101 YP_001194883Flavobacterium psychrophilum JIP02 86 YP_001296054

Thiobacillus denitrificans ATCC 25259 YP_314096Methylobacillus flagellatus KT YP_544740

Magnetococcus sp. MC-1 YP_866259Thiomicrospira crunogena XCL-2 YP_392229

Candidatus Ruthia magnifica str. Cm Calyptogena magnifica YP_903313Candidatus Vesicomyosocius okutanii HA YP_001218903

Rhodospirillum rubrum ATCC 11170 YP_428413Silicibacter pomeroyi DSS-3 YP_165019Sphingomonas wittichii RW1 YP_001262300Mesorhizobium sp. BNC1 YP_674805Rhizobium leguminosarum bv. viciae 3841 YP_766146Sinorhizobium meliloti 1021 NP_435566Sinorhizobium medicae WSM419 YP_001314551

Parvibaculum lavamentivorans DS-1 YP_001412808Caulobacter crescentus CB15 NP_420214Caulobacter sp. K31 YP_001684062

Maricaulis maris MCS10 YP_756380Hyphomonas neptunium ATCC 15444 YP_759950

Methylobacterium sp. 4-46 YP_001770109Xanthobacter autotrophicus Py2 YP_001415374Azorhizobium caulinodans ORS 571 YP_001527439

Rhodopseudomonas palustris CGA009 NP_945375Rhodopseudomonas palustris HaA2 YP_483640Rhodopseudomonas palustris BisB5 YP_567869Rhodopseudomonas palustris BisB18 YP_529913Rhodopseudomonas palustris BisA53 YP_778959Bradyrhizobium japonicum USDA 110 NP_769403Bradyrhizobium sp. ORS278 YP_001204500Bradyrhizobium sp. BTAi1 YP_001238831

Jannaschia sp. CCS1 YP_511799Paracoccus denitrificans PD1222 YP_915641Rhodobacter sphaeroides ATCC 17025 YP_001166745Rhodobacter sphaeroides 2.4.1 YP_353773Rhodobacter sphaeroides ATCC 17029 YP_001044225Dinoroseobacter shibae DFL 12 YP_001532008

Silicibacter pomeroyi DSS-3 YP_168721Roseobacter denitrificans OCh 114 YP_681602Silicibacter sp. TM1040 YP_614539Novosphingobium aromaticivorans DSM 12444 YP_497848Sphingopyxis alaskensis RB2256 YP_616722Mesorhizobium loti MAFF303099 NP_106928Mesorhizobium loti MAFF303099 NP_107099Agrobacterium tumefaciens str. C58 NP_354541Sinorhizobium meliloti 1021 NP_435911Sinorhizobium meliloti 1021 NP_435656Sinorhizobium medicae WSM419 YP_001314560Sinorhizobium medicae WSM419 YP_001314800Rhizobium leguminosarum bv. viciae 3841 YP_765315Rhizobium leguminosarum bv. viciae 3841 YP_770482Rhizobium etli CFN 42 NP_659746Rhizobium etli CFN 42 YP_473123Ochrobactrum anthropi ATCC 49188 YP_001369029Brucella abortus biovar 1 str. 9-941 YP_221148Brucella suis 1330 NP_697395Brucella canis ATCC 23365 YP_001592230Brucella melitensis 16M NP_540481Brucella melitensis biovar Abortus 2308 YP_413854Brucella ovis ATCC 25840 YP_001258397Brucella suis ATCC 23445 YP_001627054

Vibrio harveyi ATCC BAA-1116 YP_001447597Shewanella pealeana ATCC 700345 YP_001500817

Alcanivorax borkumensis SK2 YP_693071Psychrobacter sp. PRwf-1 YP_001280634Psychrobacter arcticus 273-4 YP_264065Psychrobacter cryohalolentis K5 YP_580051

Alkalilimnicola ehrlichei MLHE-1 YP_742716Thiobacillus denitrificans ATCC 25259 YP_314401

Ralstonia solanacearum GMI1000 NP_519397Ralstonia eutropha H16 YP_726783Ralstonia eutropha JMP134 YP_296249Ralstonia metallidurans CH34 YP_584192Polynucleobacter sp. QLW-P1DMWA-1 YP_001155237Polynucleobacter necessarius STIR1 YP_001798088

Bordetella petrii DSM 12804 YP_001631855Bordetella parapertussis 12822 NP_884049Bordetella bronchiseptica RB50 NP_889864Dechloromonas aromatica RCB YP_283939

Azoarcus sp. EbN1 YP_159939Azoarcus sp. BH72 YP_932845Chromobacterium violaceum ATCC 12472 NP_900844Neisseria gonorrhoeae FA 1090 YP_208434Neisseria meningitidis Z2491 NP_284684Neisseria meningitidis MC58 NP_274728Neisseria meningitidis 053442 YP_001599744Neisseria meningitidis FAM18 YP_975604Herminiimonas arsenicoxydans YP_001099927Janthinobacterium sp. Marseille YP_001353321Methylibium petroleiphilum PM1 YP_001021668Rhodoferax ferrireducens T118 YP_523187Polaromonas naphthalenivorans CJ2 YP_983999Polaromonas sp. JS666 YP_551095Acidovorax avenae subsp. citrulli AAC00-1 YP_969886Verminephrobacter eiseniae EF01-2 YP_995960Acidovorax sp. JS42 YP_985395Delftia acidovorans SPH-1 YP_001563798Leptothrix cholodnii SP-6 YP_001791809

Pseudoalteromonas atlantica T6c YP_661645Colwellia psychrerythraea 34H YP_268725Pseudoalteromonas haloplanktis TAC125 YP_340357Idiomarina loihiensis L2TR YP_155686Psychromonas ingrahamii 37 YP_942380

Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_856818Aeromonas salmonicida subsp. salmonicida A449 YP_001141804Photobacterium profundum SS9 YP_130037Vibrio fischeri ES114 YP_204682Vibrio harveyi ATCC BAA-1116 YP_001445492Vibrio cholerae O1 biovar eltor str. N16961 NP_231085Vibrio cholerae O395 YP_001216999Vibrio parahaemolyticus RIMD 2210633 NP_797923Vibrio vulnificus CMCP6 NP_761442Vibrio vulnificus YJ016 NP_934464Shewanella pealeana ATCC 700345 YP_001502069Shewanella halifaxensis HAW-EB4 YP_001674415Shewanella amazonensis SB2B YP_927666Shewanella loihica PV-4 YP_001094110Shewanella sediminis HAW-EB3 YP_001473948Shewanella woodyi ATCC 51908 YP_001760798

Shewanella oneidensis MR-1 NP_717954Shewanella sp. ANA-3 YP_869743Shewanella sp. MR-4 YP_734136Shewanella sp. MR-7 YP_738015Shewanella sp. W3-18-1 YP_963429Shewanella putrefaciens CN-32 YP_001183481Shewanella denitrificans OS217 YP_562858Shewanella frigidimarina NCIMB 400 YP_750694Shewanella baltica OS195 YP_001554649Shewanella baltica OS185 YP_001366375Shewanella baltica OS155 YP_001041605Shewanella baltica OS155 YP_001050566

Saccharophagus degradans 2-40 YP_527894Hahella chejuensis KCTC 2396 YP_433526Marinobacter aquaeolei VT8 YP_959053Pseudomonas aeruginosa UCBPP-PA14 YP_791695Pseudomonas aeruginosa PA7 YP_001349127Pseudomonas aeruginosa PAO1 NP_250248Pseudomonas mendocina ymP_YP_001188087Pseudomonas stutzeri A1501 YP_001172359Pseudomonas fluorescens Pf-5 YP_259044Pseudomonas fluorescens PfO-1 YP_347559Pseudomonas entomophila L48 YP_607455Pseudomonas putida W619 YP_001750420Pseudomonas putida GB-1 YP_001670042Pseudomonas putida KT2440 NP_746366Pseudomonas putida F1 YP_001266958

Pseudomonas stutzeri A1501 YP_001172356Pseudomonas mendocina ymP_YP_001188092Pseudomonas aeruginosa PA7 YP_001349131Pseudomonas aeruginosa PAO1 NP_250245Pseudomonas aeruginosa UCBPP-PA14 YP_791698

Pseudomonas fluorescens Pf-5 YP_259940Pseudomonas fluorescens PfO-1 YP_348243

Pseudomonas aeruginosa PA7 YP_001346344Pseudomonas aeruginosa PAO1 NP_252822Pseudomonas aeruginosa UCBPP-PA14 YP_788989

Pseudomonas aeruginosa PA7 YP_001348796Pseudomonas aeruginosa PAO1 NP_250547Pseudomonas aeruginosa UCBPP-PA14 YP_791385

Pseudomonas fluorescens PfO-1 YP_347555Pseudomonas fluorescens Pf-5 YP_259040Pseudomonas syringae pv. tomato str. DC3000 NP_791827Pseudomonas syringae pv. syringae B728a YP_236483Pseudomonas syringae pv. phaseolicola 1448A YP_275495

Pseudomonas entomophila L48 YP_607451Pseudomonas putida KT2440 NP_746371Pseudomonas putida F1 YP_001266953Pseudomonas putida GB-1 YP_001670046Pseudomonas putida W619 YP_001750424

825993

618

984

828999

1000

9881000

919

8301000

596

9281000

789

393

291

925

268

637

658

430

694

747

912

999

1000

509

965705

983

366

271

846785

4741000

976

822

447

815

822831

340340

997409

997

1000676

691

524

910

733

363

927

687743

277

224

845541

993

447

994

489

936

652

924977

445430

915

1000

602

1000

929

476

342136

101

131

312

939

613

547

588

696

452

690

1000

1000

945

971

364201

275

809

1000

8291000

781

5811000

444

1000

9981000

173

427

930

438

568574

959

10001000

200183347

244

992607

712409

1000

195

119

1000

1000

274

451

825

903

1000

9991000

935

1000

1000

1000

473

733

386

999

627990

759

998742

535

988

486

848

573

409

470

372

998

960

523

934

641265

476

908203

915

1000

595

735

914

667

1000

773

999928

529

989

615

965

1000

1000

596

635

997

919

1000

876

1000

929

970658

6491000

983

585

878

596

1000

890

1000

1000999

704

7038861000

992

1000

800

354

Suppl. Mat. 3

Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria

Delta-ProteobacteriaBacteroidetes/ChlorobiPVC

Spirochetes

Epsilon-Proteobacteria

Delta-ProteobacteriaBacteroidetes/Chlorobi

Cyanobacteria

Beta-ProteobacteriaBacteroidetes/Chlorobi

FirmicutesAcidobacteriaPVC

Page 3: Halobacterium sp. NRC-1 NP_045984

0.1

589

871.

63/.7880/.77

27/.96

35/.

100/1.

948100/1.

721

1000

1000

1000

1000

1000

1000

500

8391000

1000

1000993

1000985

413

480

1000

908

524

1000883

1000

1000

996521

938

1000

457

9991000

1000960

873988

456

1000.

614478

558

1000

875

990

1000

1000

335

453

381

806

987

536

795

Sulfolobus acidocaldarius DSM 639 YP_254815

Sulfolobus solfataricus P2 NP_341619

Metallosphaera sedula DSM 5348 YP_001192096

Sulfolobus tokodaii str. 7 NP_378042

Metallosphaera sedula DSM 5348 YP_001190669

Sulfolobus tokodaii str. 7 NP_376567

Sulfolobus tokodaii str. 7 NP_376500

Sulfolobus tokodaii str. 7 NP_378599

Metallosphaera sedula DSM 5348 YP_001190585

Metallosphaera sedula DSM 5348 YP_001190586

Sulfolobus tokodaii str. 7 NP_378396

Metallosphaera sedula DSM 5348 YP_001190391

Sulfolobus tokodaii str. 7 NP_375983

Sulfolobus solfataricus P2 NP_343985

Sulfolobus acidocaldarius DSM 639 YP_256675

Caldivirga maquilingensis IC-167 YP_001541744

Geobacillus thermodenitrificans NG80-2 YP_001125633

Geobacillus kaustophilus HTA426 YP_147524

Nitrosospira multiformis ATCC 25196 YP_413345

Azoarcus sp. EbN1 YP_159094

Nitrobacter hamburgensis X14 YP_577950

Silicibacter pomeroyi DSS-3 YP_165013

Nitrosococcus oceani ATCC 19707 YP_344942

Nitrosomonas eutropha C91 YP_748072

Nitrosomonas europaea ATCC 19718 NP_840762

Nocardioides sp. JS614 YP_922823

Sulfurovum sp. NBC37-1 YP_001357604

Sulfurimonas denitrificans DSM 1251 YP_392620

Natronomonas pharaonis DSM 2160 YP_330877

Magnetospirillum magneticum AMB-1 YP_421585

Aeropyrum pernix K1 NP_148062

Pyrobaculum calidifontis JCM 11548 YP_001056831

Pyrobaculum aerophilum str. IM2 NP_559246

Aquifex aeolicus VF5 NP_214506

Exiguobacterium sibiricum 255-15 YP_001813096

Bacillus halodurans C-125 NP_241605

Oceanobacillus iheyensis HTE831 NP_692667

Geobacillus thermodenitrificans NG80-2 YP_001125509

Geobacillus kaustophilus HTA426 YP_147399Salinibacter ruber DSM 13855 YP_444460Halobacterium salinarum R1 YP_001689972

Halobacterium sp. NRC-1 NP_444237

Haloarcula marismortui ATCC 43049 YP_135811

Natronomonas pharaonis DSM 2160 YP_327130

Halorubrum lacusprofundi ATCC 49239 ZP_02014739

Chloroflexus aurantiacus J-10-fl YP_001636024

Roseiflexus castenholzii DSM 13941 YP_001431686

Roseiflexus sp. RS-1 YP_001275293

Deinococcus geothermalis DSM 11300 YP_603490

Thermus thermophilus HB8 YP_144401

Thermus thermophilus HB27 YP_004743

Methylococcus capsulatus str. Bath YP_114811

Burkholderia xenovorans LB400 YP_556973

Burkholderia sp. 383 YP_372161

Rhizobium etli CFN 42 YP_468520

Bradyrhizobium japonicum USDA 110 NP_771120

Bradyrhizobium sp. ORS278 YP_001204332

Burkholderia vietnamiensis G4 YP_001115325

Burkholderia multivorans ATCC 17616 YP_001585717

Burkholderia thailandensis E264 YP_443386

Burkholderia pseudomallei 668 YP_001058396

Burkholderia pseudomallei 1710b YP_332896

Burkholderia pseudomallei K96243 YP_107881

Burkholderia pseudomallei 1106a YP_001065632

Crenarchaeota(Sulfolobales)

Crenarchaeota(Thermoproteales,Desulfurococcales)

Crenarchaeota(Thermoproteales)

Euryarchaeota(Halobacteriales)

Euryarchaeota(Halobacteriales)

Alpha-Proteobacteria

Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria

Deinococcus/Thermus

Chloroflexi

Alpha-ProteobacteriaBeta-ProteobacteriaGamma-Proteobacteria

Firmicutes

Firmicutes

Actinobacteria

Epsilon-proteobacteria

Aquificales

BacteroidetesChlorobi

Dox

Suppl. Mat. 4

Page 4: Halobacterium sp. NRC-1 NP_045984

Picrophilus torridus DSM 9790 YP_024082Ferroplasma acidarmanus fer1 ZP_01709051

Aeropyrum pernix K1 NP_147500Halorubrum lacusprofundi ATCC 49239 ZP_02015599Haloarcula marismortui ATCC 43049 YP_136841

Haloferax volcanii AAK14378Nitrosopumilus maritimus SCM1 YP_001581518Cenarchaeum symbiosum A YP_876890

Pyrobaculum aerophilum str. IM2 NP_559235Pyrobaculum calidifontis JCM 11548 YP_001056825Sulfolobus acidocaldarius DSM 639 YP_256842Sulfolobus solfataricus P2 NP_344288

Sulfolobus tokodaii str. 7 NP_375951Metallosphaera sedula DSM 5348 YP_001190425

Haloarcula marismortui ATCC 43049 YP_135564Halobacterium sp. NRC-1 NP_279674Halobacterium salinarum R1 YP_001688771Natronomonas pharaonis DSM 2160 YP_326879Haloarcula marismortui ATCC 43049 YP_135922Haloquadratum walsbyi DSM 16790 YP_657381Haloferax volcanii AAK14377

Deinococcus radiodurans R1 NP_296339Deinococcus geothermalis DSM 11300 YP_603878

Thermus thermophilus HB27 YP_005640Thermus thermophilus HB8 YP_143578

Aquifex aeolicus VF5 NP_214504Geobacter uraniireducens Rf4 YP_001229197

Pelobacter carbinolicus DSM 2380 YP_357934Geobacter sulfurreducens PCA NP_951280Geobacter metallireducens GS-15 YP_383219

Desulfovibrio desulfuricans G20 YP_388315Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough YP_011033Desulfovibrio vulgaris subsp. vulgaris DP4 YP_966790

Bdellovibrio bacteriovorus HD100 NP_967290Leptospira interrogans serovar Lai str. 56601 NP_710424Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 YP_000200Leptospira borgpetersenii serovar Hardjo-bovis L550 YP_796822Leptospira borgpetersenii serovar Hardjo-bovis JB197 YP_801959Sorangium cellulosum So ce 56 YP_001618242

Rhodopirellula baltica SH 1 NP_870646Salinibacter ruber DSM 13855 YP_446205

Anaeromyxobacter dehalogenans 2CP-C YP_465481Sorangium cellulosum So ce 56 YP_001615167

Myxococcus xanthus DK 1622 YP_632048Myxococcus xanthus DK 1622 YP_634222Anaeromyxobacter dehalogenans 2CP-C YP_464016Anaeromyxobacter sp. Fw109-5 YP_001378044

Chloroflexus aurantiacus J-10-fl YP_001635743Acidobacteria bacterium Ellin345 YP_592070Solibacter usitatus Ellin6076 YP_821793

Gluconacetobacter diazotrophicus PAl 5 YP_001602839Methylobacterium radiotolerans JCM 2831 YP_001753729

Nitrosococcus oceani ATCC 19707 YP_343276Ralstonia eutropha JMP134 YP_298631

Nitrobacter hamburgensis X14 YP_571634Methylobacterium sp. 4-46 YP_001772537

Methylobacterium extorquens PA1 YP_001637720Methylobacterium radiotolerans JCM 2831 YP_001766956

Anabaena variabilis ATCC 29413 YP_324077Synechocystis sp. PCC 6803 NP_441291

Anabaena variabilis ATCC 29413 YP_320079Cyanothece sp. ATCC 51142 YP_001806228Cyanothece sp. ATCC 51142 YP_001805524Trichodesmium erythraeum IMS101 YP_720232Nostoc sp. PCC 7120 NP_486772Anabaena variabilis ATCC 29413 YP_324793Synechococcus sp. PCC 7002 YP_001733987

Prochlorococcus marinus str. MIT 9515 YP_001011578Prochlorococcus marinus str. MIT 9215 YP_001484863

Synechococcus sp. WH 7803 YP_001224437Synechococcus sp. RCC307 YP_001228191

Synechococcus sp. CC9605 YP_381293Synechococcus sp. WH 8102 NP_897622Synechococcus sp. CC9311 YP_731131

Gloeobacter violaceus PCC 7421 NP_925109Gloeobacter violaceus PCC 7421 NP_923686

Trichodesmium erythraeum IMS101 YP_721510Thermosynechococcus elongatus BP-1 NP_682800Nostoc sp. PCC 7120 NP_486555Anabaena variabilis ATCC 29413 YP_320968

Synechococcus sp. JA-3-3Ab YP_474942Synechococcus sp. JA-2-3Ba2-13 YP_478886

Acaryochloris marina MBIC11017 YP_001518912Nostoc sp. PCC 7120 NP_484994Anabaena variabilis ATCC 29413 YP_321048

Synechococcus sp. PCC 7002 YP_001734418Cyanothece sp. ATCC 51142 YP_001803392Synechocystis sp. PCC 6803 NP_440609Microcystis aeruginosa NIES-843 YP_001657308

Synechococcus elongatus PCC 6301 YP_172217Synechococcus elongatus PCC 7942 YP_401620

Synechococcus sp. WH 8102 NP_897953Synechococcus sp. CC9902 YP_377756Synechococcus sp. CC9605 YP_380936Synechococcus sp. RCC307 YP_001226927

Synechococcus sp. CC9311 YP_731328Synechococcus sp. WH 7803 YP_001225595Prochlorococcus marinus str. MIT 9313 NP_895169Prochlorococcus marinus str. MIT 9303 YP_001016658Prochlorococcus marinus str. MIT 9211 YP_001550327Prochlorococcus marinus subsp. marinus str. CCMP1375 NP_874835Prochlorococcus marinus str. NATL2A YP_292967Prochlorococcus marinus str. NATL1A YP_001014326Prochlorococcus marinus subsp. pastoris str. CCMP1986 NP_892563Prochlorococcus marinus str. MIT 9515 YP_001010823Prochlorococcus marinus str. MIT 9312 YP_396941Prochlorococcus marinus str. AS9601 YP_001008895Prochlorococcus marinus str. MIT 9215 YP_001483726Prochlorococcus marinus str. MIT 9301 YP_001090693

Anaeromyxobacter sp. Fw109-5 YP_001380045Acidobacteria bacterium Ellin345 YP_589517

Solibacter usitatus Ellin6076 YP_826822Cytophaga hutchinsonii ATCC 33406 YP_678811Flavobacterium psychrophilum JIP02 86 YP_001295310Flavobacterium johnsoniae UW101 YP_001193992

Gramella forsetii KT0803 YP_860231Herminiimonas arsenicoxydans YP_001099422Polaromonas sp. JS666 YP_547581Leptothrix cholodnii SP-6 YP_001789293

Ralstonia metallidurans CH34 YP_586093Ralstonia eutropha JMP134 YP_297835Ralstonia eutropha H16 YP_841573Ralstonia solanacearum GMI1000 NP_523124Burkholderia sp. 383 YP_367049Burkholderia ambifaria AMMD YP_778088Burkholderia ambifaria MC40-6 YP_001815927

Photobacterium profundum SS9 YP_132060Methylobacterium sp. 4-46 YP_001770700Mesorhizobium loti MAFF303099 NP_102720Bradyrhizobium japonicum USDA 110 NP_770424Rhizobium etli CFN 42 YP_470115Rhizobium leguminosarum bv. viciae 3841 YP_768626Mesorhizobium sp. BNC1 YP_675024Sinorhizobium meliloti 1021 NP_386623Sinorhizobium medicae WSM419 YP_001328093

Neorickettsia sennetsu str. Miyayama YP_506501Wolbachia endosymbiont of Drosophila melanogaster NP_966102Wolbachia endosymbiont strain TRS of Brugia malayi YP_198138Anaplasma marginale str. St. Maries YP_154146Anaplasma phagocytophilum HZ YP_505633Ehrlichia chaffeensis str. Arkansas YP_507790Ehrlichia canis str. Jake YP_303439Ehrlichia ruminantium str. Welgevonden YP_180637Ehrlichia ruminantium str. Welgevonden YP_197694Ehrlichia ruminantium str. Gardel YP_196734

Orientia tsutsugamushi str. Boryong YP_001249069Rickettsia prowazekii str. Madrid E NP_220786Rickettsia akari str. Hartford YP_001493401Rickettsia canadensis str. McKiel YP_001492392Rickettsia felis URRWXCal2 YP_246643Rickettsia bellii RML369-C YP_538061Rickettsia bellii OSU 85-389 YP_001495898Rickettsia massiliae MTU5 YP_001499310Rickettsia conorii str. Malish 7 NP_360190Rickettsia rickettsii str. Sheila Smith YP_001494671Rickettsia rickettsii str. Iowa YP_001649930

Granulibacter bethesdensis CGDNIH1 YP_746079Acidiphilium cryptum JF-5 YP_001235284

Magnetospirillum magneticum AMB-1 YP_421532Jannaschia sp. CCS1 YP_509192Dinoroseobacter shibae DFL 12 YP_001533720Roseobacter denitrificans OCh 114 YP_682261Silicibacter sp. TM1040 YP_614285Silicibacter pomeroyi DSS-3 YP_166625

Paracoccus denitrificans PD1222 YP_915727Paracoccus denitrificans PD1222 YP_916807

Rhodobacter sphaeroides ATCC 17025 YP_001166875Rhodobacter sphaeroides 2.4.1 YP_351928Rhodobacter sphaeroides ATCC 17029 YP_001042415

Hyphomonas neptunium ATCC 15444 YP_759761Maricaulis maris MCS10 YP_757463

Caulobacter crescentus CB15 NP_422200Caulobacter sp. K31 YP_001686123Sphingomonas wittichii RW1 YP_001264359Sphingopyxis alaskensis RB2256 YP_616451Erythrobacter litoralis HTCC2594 YP_457435Novosphingobium aromaticivorans DSM 12444 YP_496193

Candidatus Pelagibacter ubique HTCC1062 YP_265561Nitrobacter hamburgensis X14 YP_578831Methylobacterium sp. 4-46 YP_001769241Methylobacterium extorquens PA1 YP_001640720Methylobacterium radiotolerans JCM 2831 YP_001752742

Xanthobacter autotrophicus Py2 YP_001419524Azorhizobium caulinodans ORS 571 YP_001525875Parvibaculum lavamentivorans DS-1 YP_001411950

Nitrobacter winogradskyi Nb-255 YP_316844Nitrobacter winogradskyi Nb-255 YP_317379Nitrobacter hamburgensis X14 YP_575616Nitrobacter hamburgensis X14 YP_578651

Rhodopseudomonas palustris CGA009 NP_946185Rhodopseudomonas palustris HaA2 YP_488181Rhodopseudomonas palustris BisB5 YP_567954Rhodopseudomonas palustris BisB18 YP_534629Rhodopseudomonas palustris BisA53 YP_783651Bradyrhizobium japonicum USDA 110 NP_767811Bradyrhizobium sp. ORS278 YP_001208524Bradyrhizobium sp. BTAi1 YP_001236997Mesorhizobium sp. BNC1 YP_673307Mesorhizobium loti MAFF303099 NP_107796Sinorhizobium meliloti 1021 NP_385011Sinorhizobium medicae WSM419 YP_001326210Agrobacterium tumefaciens str. C58 NP_353792Rhizobium etli CFN 42 YP_468491Rhizobium leguminosarum bv. viciae 3841 YP_766633Ochrobactrum anthropi ATCC 49188 YP_001369142Brucella abortus biovar 1 str. 9-941 YP_221246Brucella melitensis biovar Abortus 2308 YP_413953Brucella ovis ATCC 25840 YP_001258486Brucella melitensis 16M NP_540382Brucella suis ATCC 23445 YP_001627153Brucella suis 1330 NP_697496Brucella canis ATCC 23365 YP_001592327

Dechloromonas aromatica RCB YP_284689Chromobacterium violaceum ATCC 12472 NP_900270Azoarcus sp. EbN1 YP_159414

Bordetella parapertussis 12822 NP_886335Bordetella bronchiseptica RB50 NP_891206Bordetella petrii DSM 12804 YP_001628771Bordetella petrii DSM 12804 YP_001630971

Bordetella pertussis Tohama I NP_882246Bordetella parapertussis 12822 NP_886371Bordetella bronchiseptica RB50 NP_891363Polynucleobacter sp. QLW-P1DMWA-1 YP_001156715Polynucleobacter necessarius STIR1 YP_001798332

Ralstonia solanacearum GMI1000 NP_518484Ralstonia metallidurans CH34 YP_582417Ralstonia eutropha JMP134 YP_294541Ralstonia eutropha H16 YP_724862Herminiimonas arsenicoxydans YP_001101152Janthinobacterium sp. Marseille YP_001354841Methylibium petroleiphilum PM1 YP_001022368Acidovorax sp. JS42 YP_987725Delftia acidovorans SPH-1 YP_001562703Acidovorax avenae subsp. citrulli AAC00-1 YP_972223Verminephrobacter eiseniae EF01-2 YP_996163Leptothrix cholodnii SP-6 YP_001792838Rhodoferax ferrireducens T118 YP_522942Polaromonas sp. JS666 YP_548095Polaromonas naphthalenivorans CJ2 YP_981117Acidovorax avenae subsp. citrulli AAC00-1 YP_971882Burkholderia pseudomallei 1710b YP_336750Burkholderia pseudomallei 668 YP_001061143Burkholderia pseudomallei K96243 YP_110109Burkholderia pseudomallei 1106a YP_001074155

Burkholderia xenovorans LB400 YP_556882Burkholderia vietnamiensis G4 YP_001120772Burkholderia ambifaria MC40-6 YP_001809456Burkholderia multivorans ATCC 17616 YP_001578649Burkholderia sp. 383 YP_370413Burkholderia cenocepacia AU 1054 YP_622106Burkholderia ambifaria AMMD YP_774791Burkholderia cenocepacia HI2424 YP_836489Burkholderia cenocepacia MC0-3 YP_001766138Burkholderia thailandensis E264 YP_440985Burkholderia mallei ATCC 23344 YP_104673Burkholderia pseudomallei K96243 YP_107079Burkholderia mallei NCTC 10229 YP_001027406Burkholderia pseudomallei 1710b YP_332087Burkholderia mallei NCTC 10247 YP_001082371Burkholderia pseudomallei 668 YP_001057543Burkholderia mallei SAVP1 YP_991520Burkholderia pseudomallei 1106a YP_001064791

Nitrosospira multiformis ATCC 25196 YP_410884Nitrosospira multiformis ATCC 25196 YP_412465

Nitrosomonas europaea ATCC 19718 NP_841089Nitrosomonas eutropha C91 YP_748573

Thiobacillus denitrificans ATCC 25259 YP_314084Nitrosococcus oceani ATCC 19707 YP_345017

Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_096890Legionella pneumophila str. Paris YP_125263Legionella pneumophila str. Lens YP_128137Legionella pneumophila str. Corby YP_001252428Saccharophagus degradans 2-40 YP_525513Hahella chejuensis KCTC 2396 YP_431395Marinobacter aquaeolei VT8 YP_957357Pseudomonas stutzeri A1501 YP_001174628Pseudomonas mendocina ymP_YP_001185649Pseudomonas aeruginosa PA7 YP_001345577Pseudomonas aeruginosa PAO1 NP_248796Pseudomonas aeruginosa UCBPP-PA14 YP_788264Pseudomonas fluorescens Pf-5 YP_257214Pseudomonas fluorescens PfO-1 YP_345811Pseudomonas putida W619 YP_001746998Pseudomonas putida KT2440 NP_742274Pseudomonas putida F1 YP_001265479Pseudomonas entomophila L48 YP_605868Pseudomonas putida GB-1 YP_001666370Candidatus Ruthia magnifica str. Cm Calyptogena magnifica YP_903309Candidatus Vesicomyosocius okutanii HA YP_001218898Methylococcus capsulatus str. Bath YP_113374Alkalilimnicola ehrlichei MLHE-1 YP_741139

Xanthomonas campestris pv. campestris str. ATCC 33913 NP_639177Xanthomonas campestris pv. campestris str. 8004 YP_244964Xanthomonas axonopodis pv. citri str. 306 NP_644193Xanthomonas campestris pv. vesicatoria str. 85-10 YP_365736Xanthomonas oryzae pv. oryzae KACC10331 YP_202779Xanthomonas oryzae pv. oryzae MAFF 311018 YP_452948

Alcanivorax borkumensis SK2 YP_693619Pseudoalteromonas atlantica T6c YP_663798Pseudoalteromonas haloplanktis TAC125 YP_341349Psychromonas ingrahamii 37 YP_944025

Photobacterium profundum SS9 YP_128409Colwellia psychrerythraea 34H YP_267002

Idiomarina loihiensis L2TR YP_154651Vibrio parahaemolyticus RIMD 2210633 NP_800047Vibrio harveyi ATCC BAA-1116 YP_001448390Vibrio vulnificus CMCP6 NP_762523Vibrio vulnificus YJ016 NP_937171Shewanella halifaxensis HAW-EB4 YP_001672492Shewanella amazonensis SB2B YP_929356Shewanella loihica PV-4 YP_001092255Shewanella sediminis HAW-EB3 YP_001471938Shewanella pealeana ATCC 700345 YP_001503845Shewanella woodyi ATCC 51908 YP_001758573Shewanella denitrificans OS217 YP_564516Shewanella frigidimarina NCIMB 400 YP_748958Shewanella sp. MR-7 YP_739899Shewanella sp. ANA-3 YP_871616Shewanella sp. MR-4 YP_735912Shewanella sp. W3-18-1 YP_961539Shewanella putrefaciens CN-32 YP_001185289Shewanella baltica OS195 YP_001556730Shewanella baltica OS185 YP_001368360Shewanella oneidensis MR-1 NP_720123Shewanella baltica OS155 YP_001048556

Tropheryma whipplei str. Twist NP_787372Tropheryma whipplei TW08 27 NP_789455

Leifsonia xyli subsp. xyli str. CTCB07 YP_062417Clavibacter michiganensis subsp. michiganensis NCPPB 382 YP_001222583Clavibacter michiganensis subsp. sepedonicus YP_001710118Renibacterium salmoninarum ATCC 33209 YP_001624733Arthrobacter sp. FB24 YP_831696Arthrobacter aurescens TC1 YP_947955

Kineococcus radiotolerans SRS30216 YP_001362986Propionibacterium acnes KPA171202 YP_055417

Acidothermus cellulolyticus 11B YP_872249Acidothermus cellulolyticus 11B YP_872716

Thermobifida fusca YX YP_289753Thermobifida fusca YX YP_288942

Thermobifida fusca YX YP_289077Streptomyces coelicolor A32 NP_626411Streptomyces avermitilis MA-4680 NP_827224

Streptomyces coelicolor A32 NP_631290Streptomyces avermitilis MA-4680 NP_827713Nocardioides sp. JS614 YP_919310Nocardioides sp. JS614 YP_924329

Frankia sp. CcI3 YP_481589Frankia sp. EAN1pec YP_001506146Frankia sp. CcI3 YP_481112Frankia alni ACN14a YP_714342Frankia sp. EAN1pec YP_001505257Frankia alni ACN14a YP_716216

Frankia alni ACN14a YP_715300Frankia sp. CcI3 YP_482202Frankia sp. CcI3 YP_482900

Salinispora tropica CNB-440 YP_001157943Salinispora arenicola CNS-205 YP_001535885

Salinispora tropica CNB-440 YP_001158972Salinispora arenicola CNS-205 YP_001537144

Saccharopolyspora erythraea NRRL 2338 YP_001103438Saccharopolyspora erythraea NRRL 2338 YP_001109127Rhodococcus sp. RHA1 YP_707487Rhodococcus sp. RHA1 YP_704173Rhodococcus sp. RHA1 YP_706379Nocardia farcinica IFM 10152 YP_117403

Nocardia farcinica IFM 10152 YP_120507Corynebacterium jeikeium K411 YP_250256Corynebacterium urealyticum DSM 7109 YP_001800872Corynebacterium diphtheriae NCTC 13129 NP_940201Corynebacterium efficiens YS-314 NP_739028Corynebacterium glutamicum R YP_001139341Corynebacterium glutamicum ATCC 13032 NP_601724Corynebacterium glutamicum ATCC 13032 YP_226765

Mycobacterium abscessus YP_001703352Mycobacterium abscessus YP_001701786Mycobacterium ulcerans Agy99 YP_905358Mycobacterium smegmatis str. MC2 155 YP_888712Mycobacterium avium subsp. paratuberculosis K-10 NP_962025Mycobacterium avium 104 YP_883070Mycobacterium ulcerans Agy99 YP_905820Mycobacterium leprae TN NP_302190Mycobacterium tuberculosis H37Ra YP_001284419Mycobacterium tuberculosis F11 YP_001288988Mycobacterium bovis BCG str. Pasteur 1173P2 YP_979151Mycobacterium tuberculosis H37Rv NP_217559Mycobacterium tuberculosis CDC1551 NP_337644Mycobacterium bovis AF2122 97 NP_856714Mycobacterium vanbaalenii PYR-1 YP_956381Mycobacterium gilvum PYR-GCK YP_001132466Mycobacterium sp. KMS YP_937889Mycobacterium sp. JLS YP_001070112Mycobacterium sp. MCS YP_639017Mycobacterium sp. JLS YP_001071718Mycobacterium sp. MCS YP_640601Mycobacterium sp. KMS YP_939485Mycobacterium abscessus YP_001704119

Mycobacterium gilvum PYR-GCK YP_001135534Mycobacterium vanbaalenii PYR-1 YP_952903Mycobacterium sp. KMS YP_935664Mycobacterium gilvum PYR-GCK YP_001136592Mycobacterium vanbaalenii PYR-1 YP_954495Mycobacterium gilvum PYR-GCK YP_001134083Mycobacterium gilvum PYR-GCK YP_001136626

Nitrosospira multiformis ATCC 25196 YP_411159Burkholderia xenovorans LB400 YP_555356Burkholderia xenovorans LB400 YP_558837Burkholderia pseudomallei 1106a YP_001065064Burkholderia pseudomallei K96243 YP_107348Burkholderia pseudomallei 668 YP_001057822Burkholderia pseudomallei 1710b YP_332357Burkholderia multivorans ATCC 17616 YP_001585463Burkholderia vietnamiensis G4 YP_001115017Burkholderia ambifaria AMMD YP_778451Burkholderia ambifaria MC40-6 YP_001816273Burkholderia cenocepacia MC0-3 YP_001773760Burkholderia cenocepacia HI2424 YP_840161Burkholderia cenocepacia AU 1054 YP_621172Burkholderia xenovorans LB400 YP_555443Solibacter usitatus Ellin6076 YP_828106Mesorhizobium loti MAFF303099 NP_109481Rhizobium etli CFN 42 YP_471835Sinorhizobium medicae WSM419 YP_001314880Methylobacterium extorquens PA1 YP_001637594Methylobacterium sp. 4-46 YP_001769836

Methylobacillus flagellatus KT YP_545557Dinoroseobacter shibae DFL 12 YP_001542100

Nitrosococcus oceani ATCC 19707 YP_343768Rhodopirellula baltica SH 1 NP_866086Rhodobacter sphaeroides ATCC 17025 YP_001167902Rhodobacter sphaeroides 2.4.1 YP_353192Rhodobacter sphaeroides ATCC 17029 YP_001043635

Azoarcus sp. EbN1 YP_159601Bordetella petrii DSM 12804 YP_001631825Mesorhizobium sp. BNC1 YP_675332Sinorhizobium meliloti 1021 NP_437488Sinorhizobium medicae WSM419 YP_001313492Pseudomonas stutzeri A1501 YP_001172366Pseudomonas mendocina ymP_YP_001187757Azoarcus sp. EbN1 YP_157109Azoarcus sp. BH72 YP_933261Nitrobacter winogradskyi Nb-255 YP_318920Parvibaculum lavamentivorans DS-1 YP_001411844

Rhodobacter sphaeroides ATCC 17025 YP_001169842Rhodobacter sphaeroides 2.4.1 YP_354614Rhodobacter sphaeroides ATCC 17029 YP_001045676

Rhodopseudomonas palustris HaA2 YP_483778Rhodopseudomonas palustris BisB18 YP_533702Rhodopseudomonas palustris BisA53 YP_782773

Herpetosiphon aurantiacus ATCC 23779 YP_001542885Roseiflexus sp. RS-1 YP_001276593Roseiflexus castenholzii DSM 13941 YP_001433624

Solibacter usitatus Ellin6076 YP_828774Symbiobacterium thermophilum IAM 14863 YP_075926Exiguobacterium sibiricum 255-15 YP_001814456

Bacillus halodurans C-125 NP_243480Bacillus clausii KSM-K16 YP_175888

Oceanobacillus iheyensis HTE831 NP_692359Lysinibacillus sphaericus C3-41 YP_001697134

Bacillus licheniformis ATCC 14580 YP_078884Bacillus licheniformis ATCC 14580 YP_091296Bacillus pumilus SAFR-032 YP_001486625Bacillus subtilis subsp. subtilis str. 168 NP_389373Bacillus amyloliquefaciens FZB42 YP_001421070

Geobacillus kaustophilus HTA426 YP_146936Geobacillus thermodenitrificans NG80-2 YP_001125071Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001375874Bacillus cereus ATCC 10987 NP_980285Bacillus cereus ATCC 14579 NP_833662Bacillus weihenstephanensis KBAB4 YP_001646566Bacillus anthracis str. Sterne YP_030105Bacillus cereus E33L YP_085284Bacillus thuringiensis str. Al Hakam YP_896311Bacillus thuringiensis serovar konkukian str. 97-27 YP_038005Bacillus anthracis str. Ames NP_846391Bacillus anthracis str. Ames Ancestor YP_020800

Lysinibacillus sphaericus C3-41 YP_001699583Oceanobacillus iheyensis HTE831 NP_693175Lysinibacillus sphaericus C3-41 YP_001698546

Bacillus cereus subsp. cytotoxis NVH 391-98 YP_001373933Bacillus cereus ATCC 10987 NP_977096Bacillus cereus ATCC 14579 NP_830510Bacillus weihenstephanensis KBAB4 YP_001643510Bacillus cereus E33L YP_082219Bacillus thuringiensis str. Al Hakam YP_893531Bacillus anthracis str. Sterne YP_026945Bacillus thuringiensis serovar konkukian str. 97-27 YP_034958Bacillus anthracis str. Ames NP_843229Bacillus anthracis str. Ames Ancestor YP_017332Geobacillus kaustophilus HTA426 YP_149311Geobacillus thermodenitrificans NG80-2 YP_001127472

Bacillus halodurans C-125 NP_242931Bacillus clausii KSM-K16 YP_175632Listeria monocytogenes EGD-e NP_463547Listeria innocua Clip11262 NP_469361Listeria monocytogenes str. 4b F2365 YP_012629Listeria welshimeri serovar 6b str. SLCC5334 YP_848218

Bacillus subtilis subsp. subtilis str. 168 NP_391695Bacillus amyloliquefaciens FZB42 YP_001423102Bacillus pumilus SAFR-032 YP_001488673Bacillus licheniformis ATCC 14580 YP_081116Bacillus licheniformis ATCC 14580 YP_093545

Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 YP_301821Staphylococcus haemolyticus JCSC1435 YP_253817Staphylococcus epidermidis ATCC 12228 NP_764313Staphylococcus epidermidis RP62A YP_188230Staphylococcus aureus subsp. aureus COL YP_185933Staphylococcus aureus subsp. aureus MW2 NP_645760Staphylococcus aureus RF122 YP_416411Staphylococcus aureus subsp. aureus USA300 YP_493660Staphylococcus aureus subsp. aureus NCTC 8325 YP_499553Staphylococcus aureus subsp. aureus USA300 TCH1516 YP_001574903Staphylococcus aureus subsp. aureus str. Newman YP_001331963Staphylococcus aureus subsp. aureus JH1 YP_001316283Staphylococcus aureus subsp. aureus Mu3 YP_001441642Staphylococcus aureus subsp. aureus JH9 YP_001246495Staphylococcus aureus subsp. aureus Mu50 NP_371584Staphylococcus aureus subsp. aureus N315 NP_374179Staphylococcus aureus subsp. aureus MSSA476 YP_043120Staphylococcus aureus subsp. aureus MRSA252 YP_040448

Acidiphilium cryptum JF-5 YP_001234229Candidatus Carsonella ruddii PV YP_802566

Candidatus Protochlamydia amoebophila UWE25 YP_008189Bartonella bacilliformis KC583 YP_989523Bartonella tribocorum CIP_105476 YP_001608617Bartonella henselae str. Houston-1 YP_032982Bartonella quintana str. Toulouse YP_031835

Nitrosomonas eutropha C91 YP_746933Mesorhizobium sp. BNC1 YP_676071

Nitrobacter winogradskyi Nb-255 YP_317387Nitrobacter hamburgensis X14 YP_578641

Legionella pneumophila str. Paris YP_122635Coxiella burnetii Dugway 5J108-111 YP_001424381Coxiella burnetii RSA 331 YP_001596689Coxiella burnetii RSA 493 NP_820041

Bradyrhizobium japonicum USDA 110 NP_769355Bradyrhizobium sp. ORS278 YP_001206809Bradyrhizobium sp. BTAi1 YP_001239191

Ochrobactrum anthropi ATCC 49188 YP_001368609Brucella melitensis 16M NP_540817Brucella ovis ATCC 25840 YP_001258090Brucella suis ATCC 23445 YP_001626723Brucella suis 1330 NP_697085Brucella canis ATCC 23365 YP_001591920Methylobacterium extorquens PA1 YP_001641776Methylobacterium radiotolerans JCM 2831 YP_001754410

Methylobacterium sp. 4-46 YP_001772457Silicibacter sp. TM1040 YP_614279

Rhizobium etli CFN 42 YP_472195Rhizobium leguminosarum bv. viciae 3841 YP_771074Agrobacterium tumefaciens str. C58 NP_353177

Sinorhizobium meliloti 1021 NP_437856Sinorhizobium medicae WSM419 YP_001313108Caulobacter crescentus CB15 NP_420580Alcanivorax borkumensis SK2 YP_693756

Methylibium petroleiphilum PM1 YP_001020937Bordetella parapertussis 12822 NP_883412Bordetella bronchiseptica RB50 NP_887855Bordetella pertussis Tohama I NP_881338Bordetella petrii DSM 12804 YP_001632007Ralstonia eutropha JMP134 YP_299083Ralstonia metallidurans CH34 YP_587737Ralstonia eutropha H16 YP_729182Acidovorax avenae subsp. citrulli AAC00-1 YP_970574Acidovorax sp. JS42 YP_986993Delftia acidovorans SPH-1 YP_001565074Herminiimonas arsenicoxydans YP_001100944Janthinobacterium sp. Marseille YP_001354329Mesorhizobium loti MAFF303099 NP_107274

Sphingopyxis alaskensis RB2256 YP_616553Paracoccus denitrificans PD1222 YP_918863

Azorhizobium caulinodans ORS 571 YP_001525015Bradyrhizobium japonicum USDA 110 NP_766790Rhodopseudomonas palustris HaA2 YP_483863Rhodopseudomonas palustris BisB5 YP_567735

Bradyrhizobium sp. ORS278 YP_001203834Bradyrhizobium sp. BTAi1 YP_001238127

Acinetobacter sp. ADP1 YP_047021Acinetobacter baumannii ATCC 17978 YP_001085196Acinetobacter baumannii SDF YP_001706978Acinetobacter baumannii AYE YP_001713301Francisella tularensis subsp. novicida U112 YP_897860Francisella tularensis subsp. holarctica YP_512987Francisella tularensis subsp. holarctica FTA YP_001427640Francisella tularensis subsp. holarctica OSU18 YP_762853Francisella tularensis subsp. tularensis FSC198 YP_666464Francisella tularensis subsp. tularensis SCHU S4 YP_169332Francisella tularensis subsp. tularensis WY96-3418 YP_001122595

Chromohalobacter salexigens DSM 3043 YP_573011Aeromonas hydrophila subsp. hydrophila ATCC 7966 YP_857449Aeromonas salmonicida subsp. salmonicida A449 YP_001142711Vibrio parahaemolyticus RIMD 2210633 NP_800138Vibrio harveyi ATCC BAA-1116 YP_001447623

Sodalis glossinidius str. morsitans YP_454346Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis NP_871151Baumannia cicadellinicola str. Hc Homalodisca coagulata YP_588718Candidatus Blochmannia floridanus NP_878541Candidatus Blochmannia pennsylvanicus str. BPEN YP_277755

Pectobacterium atrosepticum SCRI1043 YP_049248Photorhabdus luminescens subsp. laumondii TTO1 NP_931081Serratia proteamaculans 568 YP_001477321Yersinia enterocolitica subsp. enterocolitica 8081 YP_001007324Yersinia pestis Pestoides F YP_001164135Yersinia pseudotuberculosis IP_31758 YP_001402059Yersinia pestis KIM NP_668350Yersinia pestis Angola YP_001607427Yersinia pseudotuberculosis YPIII YP_001721964Yersinia pestis CO92 NP_406640Yersinia pestis biovar Microtus str. 91001 NP_992154Yersinia pseudotuberculosis IP_32953 YP_069492Yersinia pestis Antiqua YP_652566Yersinia pestis Nepal516 YP_646858

Buchnera aphidicola str. APS Acyrthosiphon pisum NP_240282Buchnera aphidicola str. Sg Schizaphis graminum NP_660787

Buchnera aphidicola str. BP_Baizongia pistaciae NP_778021Buchnera aphidicola str. Cc Cinara cedri YP_802843

Enterobacter sakazakii ATCC BAA-894 YP_001438936Citrobacter koseri ATCC BAA-895 YP_001454272Klebsiella pneumoniae subsp. pneumoniae MGH 78578 YP_001334075Enterobacter sp. 638 YP_001175633Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 YP_001589333Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 YP_215471Salmonella typhimurium LT2 NP_459438Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NP_806148Salmonella enterica subsp. enterica serovar Typhi str. CT18 NP_455039Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 YP_151477Salmonella enterica subsp. arizonae serovar 62 YP_001571493Shigella boydii Sb227 YP_406866Escherichia coli O157 H7 EDL933 NP_286173Escherichia coli str. K-12 substr. MG1655 NP_414965Escherichia coli O157 H7 str. Sakai NP_308512Escherichia coli str. K12 substr. W3110 AP_001081Escherichia coli UTI89 YP_539487Shigella sonnei Ss046 YP_309425Escherichia coli CFT073 NP_752476Escherichia coli DH10B YP_001729337Escherichia coli SECEC SMS-3-5 YP_001742572Escherichia coli E24377A YP_001461617Escherichia coli HS YP_001457274Escherichia coli APEC O1 YP_851604Escherichia coli 536 YP_668419Pseudomonas fluorescens Pf-5 YP_261816Granulibacter bethesdensis CGDNIH1 YP_745096

Gluconobacter oxydans 621H YP_192306Gluconacetobacter diazotrophicus PAl 5 YP_001602279

Burkholderia vietnamiensis G4 YP_001120648Burkholderia thailandensis E264 YP_442319Burkholderia pseudomallei K96243 YP_108972Burkholderia pseudomallei 1106a YP_001067024Burkholderia pseudomallei 668 YP_001059739Burkholderia pseudomallei 1710b YP_334218Burkholderia mallei SAVP1 YP_993718Burkholderia mallei NCTC 10229 YP_001028824Burkholderia mallei NCTC 10247 YP_001081265

Burkholderia vietnamiensis G4 YP_001119810Burkholderia multivorans ATCC 17616 YP_001579395Burkholderia ambifaria AMMD YP_773996Burkholderia ambifaria MC40-6 YP_001808673Burkholderia sp. 383 YP_369613Burkholderia cenocepacia MC0-3 YP_001765372Burkholderia cenocepacia AU 1054 YP_625845Burkholderia cenocepacia HI2424 YP_835714Burkholderia xenovorans LB400 YP_553679

Burkholderia thailandensis E264 YP_438680Burkholderia pseudomallei 668 YP_001063707Burkholderia pseudomallei 1710b YP_336150Burkholderia pseudomallei K96243 YP_111902Burkholderia pseudomallei 1106a YP_001076601Burkholderia mallei SAVP1 YP_990966Burkholderia mallei ATCC 23344 YP_105022Burkholderia mallei NCTC 10229 YP_001025367Burkholderia mallei NCTC 10247 YP_001077431

Methylobacillus flagellatus KT YP_545403Bordetella petrii DSM 12804 YP_001631310Bordetella bronchiseptica RB50 NP_887830Bordetella parapertussis 12822 NP_883388Bordetella pertussis Tohama I NP_881514Ralstonia eutropha JMP134 YP_298772Ralstonia metallidurans CH34 YP_587920Ralstonia solanacearum GMI1000 NP_519980Ralstonia eutropha H16 YP_726142

Xylella fastidiosa 9a5c NP_298678Xylella fastidiosa Temecula1 NP_778846Xylella fastidiosa M12 YP_001775363Xanthomonas oryzae pv. oryzae KACC10331 YP_200269Xanthomonas oryzae pv. oryzae MAFF 311018 YP_450545Xanthomonas axonopodis pv. citri str. 306 NP_641594Xanthomonas campestris pv. vesicatoria str. 85-10 YP_363039Xanthomonas campestris pv. campestris str. ATCC 33913 NP_636534Xanthomonas campestris pv. campestris str. 8004 YP_244149

Ralstonia solanacearum GMI1000 NP_521037Ralstonia metallidurans CH34 YP_583104Ralstonia eutropha JMP134 YP_295206Ralstonia eutropha H16 YP_725581Pseudomonas aeruginosa PAO1 NP_250009Pseudomonas aeruginosa PA7 YP_001349426Pseudomonas aeruginosa UCBPP-PA14 YP_791927Pseudomonas putida W619 YP_001751224Pseudomonas entomophila L48 YP_606676Pseudomonas putida GB-1 YP_001667096Pseudomonas putida KT2440 NP_742974Pseudomonas putida F1 YP_001266182Pseudomonas fluorescens Pf-5 YP_262115Pseudomonas fluorescens PfO-1 YP_350375Pseudomonas syringae pv. tomato str. DC3000 NP_791153Pseudomonas syringae pv. syringae B728a YP_234234Pseudomonas syringae pv. phaseolicola 1448A YP_273477Chromobacterium violaceum ATCC 12472 NP_903665Marinomonas sp. MWYL1 YP_001338967Pseudoalteromonas haloplanktis TAC125 YP_340728Pseudoalteromonas atlantica T6c YP_660871Shewanella frigidimarina NCIMB 400 YP_748924Shewanella woodyi ATCC 51908 YP_001758825Shewanella loihica PV-4 YP_001092498Shewanella sp. W3-18-1 YP_961501Shewanella putrefaciens CN-32 YP_001185364Shewanella baltica OS185 YP_001368398Shewanella baltica OS195 YP_001556769Shewanella sp. ANA-3 YP_871655Shewanella sp. MR-7 YP_739949Shewanella sp. MR-4 YP_735944

Azoarcus sp. BH72 YP_934805

0.1

1000

9231000

746

999

1000

1000

510820

1000

1000

1000

997982

679

914

1000

587

877

1000

1000

1000

409

1000

429

881

1000

626937

939

841

874

505

997

551

10005181000

1000739

701

908

1000874

10001000

1000

616

1000

1000

1000

1000

624

710

1000554

1000

165

902

513

423

854

990

1000

325

593

731

997

217

63

341

515

1000

339

305

225

561

51

1000

1000

5551000

519997

994

995

919

992693

912626841

448

179

520

997

1000

913

806

780974

333

1000

835998

283

573

1000

592

1000

852

829409

969

487

8921000

327

1000

1000

1000

1000

994779

849

956826

383

632

958

629

515

999

954

641

343

645

282596

179

999

1000

990

236

461

285

297

612

332

143

338

1000

969

1000

954

9201000

650

1000

1000

967509

661956

628

996

991

149

746

1000362

639986

1000

727

952685

822936

677

1000989948

994

515

662

984

647

438

1000

984

995

212

999

1000

1000

436922

1000

824

315

1000

646907

829

1000

1000

976

203341580

999

519

241

582

165

257

195

1000

430

45

183

1000

87

812

3350

971

690

807

218

1000948

932996

1000374

837939

999

400

298

163

20

999

992950

802

663724

896

1000

825

1000

1000455

903

506

614

252

875

881

8251000

1000999

1000

193

86

1000

428

816

542

717589

999

565

165

997

434996

8281000

934

655109

806

469523

984

202

535

203

85

241

926

146

652

534

297

9

213

235

273

335

1000

1000

4057921000

1000

9371000

409

731

981

1000

676

1000

611

1000

10001000

947

880

9671000

5731000

629

10001000

993

925

835

5841000

607

10001000

9911000

368

999

991

599

1000

359

1000

969

1000878

1000

1000

996515

997

1000

381

593

419

593449

730

543

569

1000

771

706

571

398

729

955

801963

515

53496181

345979

1000

997

1000

8011331000

999

1000597

463

1000

159

219

285

343

368

614211

169

138

100

810

1000

838

1000

808

218

789

779

773851

100078

313

1000

855

7421000

998

9981000

4665026571000

1000

955

432

1000

999602

770

138

6921000

987938

473

759

351

971994

990

969607

910

956

574

818

625

817

220

196

383

235

407

166

731

181

56

5759871000

5557603813619351000

1000

1000

244

982853

750938

616

939130

724

982

818

317

95

1000

978

923

606

181

410

276

997

384

454

732716

432168103425490

628

150

2697364

71

34142

281

295

140

27

434

1000

569

968

910

142

375

246

80

1000

524982414457342

8879691000

796

508985263

88

401

794

521

753

825

48168644

993

859

826

924

948

785

389

6881000

957

571

972

1000

958

9781000

1000

998

999

693

998

995

478

109

7401000

560

7221000

631

799741

1000

1000

993998

535

1000

1000

1000

843997

762

556

573

524

899817

612

967374

775

998

109

78

57

51

20

94

43

30

29

106

447

999

1000

916

854

660

291

785

294

917

1000

632666

389

990503

90

426

773

252

195

4539921000

176

335401

300

483

638846

590

71213089696249926

737

969

675

355

817

849

10005351000

3563571000

601

8201000

828

797255365767

822

477

837

978

456

978

1000

999

805651965

1000

674

305

154

958477

344

9947691000

425

179166

65

195

285376

998

157161555

322

806

511

482

881

526

183

355

707

915

192

344

448

734

341

198

334

1000

221

Crenarchaeota(Desulfurococcales)(Sulfolobales)(Thermoproteales)

Euryarchaeota(Thermoplasmatales)(Halobacteriales)

Thaumarchaeota

Deinococci/thermus

Aquificales

Delta-ProteobacteriaGamma-ProteobacteriaBeta-ProteobacteriaAlpha-ProteobacteriaBacteroidetes/ChlorobiAcidobacteriaChloroflexiPVC

Cyanobacteria

Proteobacteria IIBacteroidetes/ChlorobiAlpha-ProteobacteriaBeta-proteobacteriaGamma-ProteobacteriaAcidobacteriaDelta-proteobacteria

Alpha-Proteobacteria

Beta-Proteobacteria

Gamma-Proteobacteria

Proteobacteria I(Gamma-Proteobacteria)(Beta-Proteobacteria)(Alpha-Proteobacteria)(PVC)

Firmicutes I

Firmicutes II

CloroflexiAcidobacteria

Proteobacteria IIIGamma-ProteobacteriaBeta-ProteobacteriaAlpha-ProteobacteriaAcidobacteriaPVC

Actinobacteria

Suppl. Mat. 5

Page 5: Halobacterium sp. NRC-1 NP_045984

Suppl. Mat. 6

760

1000

0.1

Arcobacter butzleri RM4018 YP_001490279

Sulfolobus solfataricus P2 NP_342994

Caldivirga maquilingensis IC-167 YP_001540124

Pyrobaculum arsenaticum DSM 13514 YP_001152749

Pyrobaculum aerophilum str. IM2 NP_560853

Pyrobaculum calidifontis JCM 11548 YP_001056790

Desulfitobacterium hafniense Y51 YP_517398

Methylococcus capsulatus str. Bath YP_114815

Nitratiruptor sp. SB155-2 YP_001357257

Sulfurimonas denitrificans DSM 1251 YP_394493

Sulfurovum sp. NBC37-1 YP_001357561

Anaeromyxobacter sp. Fw109-5 YP_001379942

Bdellovibrio bacteriovorus HD100 NP_969401

Nitrosospira multiformis ATCC 25196 YP_411950

Thiobacillus denitrificans ATCC 25259 YP_314581

Acidovorax sp. JS42 YP_987627

Shewanella denitrificans OS217 YP_562986

Magnetococcus sp. MC-1 YP_864053

Leptothrix cholodnii SP-6 YP_001790501

Azoarcus sp. BH72 YP_934592

Dechloromonas aromatica RCB YP_286391

Azoarcus sp. EbN1 YP_157126Thiobacillus denitrificans ATCC 25259 YP_314319

Photobacterium profundum SS9 YP_132726

Colwellia psychrerythraea 34H YP_267351

Hahella chejuensis KCTC 2396 YP_435539

Marinobacter aquaeolei VT8 YP_960376

Pseudomonas stutzeri A1501 YP_001173991

Bordetella petrii DSM 12804 YP_001632665

Pseudomonas aeruginosa UCBPP-PA14 YP_788694

Pseudomonas aeruginosa PAO1 NP_249215

Pseudomonas aeruginosa PA7 YP_001346020

155

Alkalilimnicola ehrlichei MLHE-1 YP_742950

Nitrosococcus oceani ATCC 19707 YP_343846

Nitrosomonas europaea ATCC 19718 NP_842019

Nitrosomonas eutropha C91 YP_746761

Paracoccus denitrificans PD1222 YP_916266

Rhodobacter sphaeroides ATCC 17025 YP_001167177

Rhodobacter sphaeroides 2.4.1 YP_353400

Rhodobacter sphaeroides ATCC 17029 YP_001043844

Roseobacter denitrificans OCh 114 YP_681875

Silicibacter pomeroyi DSS-3 YP_165045

Dinoroseobacter shibae DFL 12 YP_001534518

Magnetospirillum magneticum AMB-1 YP_422307

Rhizobium etli CFN 42 YP_473132

Sinorhizobium meliloti 1021 NP_435940

Sinorhizobium medicae WSM419 YP_001314819

Agrobacterium tumefaciens str. C58 NP_356267

Rhodopseudomonas palustris CGA009 NP_946806

Rhodopseudomonas palustris BisA53 YP_779559

Bradyrhizobium japonicum USDA 110 NP_769855

Bradyrhizobium sp. ORS278 YP_001203888

Bradyrhizobium sp. BTAi1 YP_001238182991999

886

Ochrobactrum anthropi ATCC 49188 YP_001372916

Brucella abortus biovar 1 str. 9-941 YP_223677

Brucella melitensis biovar Abortus 2308 YP_419097715

Brucella melitensis 16M NP_541976

Brucella suis 1330 NP_699446

Brucella canis ATCC 23365 YP_001594211

Brucella suis ATCC 23445 YP_001622088716

536

999

979

531

978715

1000992

1000

5871000

891

393

542

793

228

120

801

980

614997

559

252

211

248

979

1000658

10001000

585498

481

999

711

966

886

333

1000

582

985

993

545

996

997

659

Legionella pneumophila str. Corby YP_001250986

Legionella pneumophila str. Paris YP_124501

Legionella pneumophila subsp. pneumophila str. Philadelphia 1 YP_096248

Legionella pneumophila str. Lens YP_1274976425331000

Burkholderia thailandensis E264 YP_439142

Burkholderia pseudomallei 668 YP_001063055

Burkholderia pseudomallei 1106a YP_001075999768 Burkholderia mallei NCTC 10247 YP_001078795

Burkholderia mallei NCTC 10229 YP_001024473

Burkholderia mallei ATCC 23344 YP_105512

Burkholderia mallei SAVP1 YP_990155865227

999

1000

1000

Haloarcula marismortui ATCC 43049 YP_136806

Halorubrum lacusprofundi ATCC 49239 ZP_020152451000

Staphylococcus aureus subsp. aureus MRSA252 YP_039724

Bacillus licheniformis ATCC 14580 YP_079248

Bacillus licheniformis ATCC 14580 YP_0916671000

Geobacillus kaustophilus HTA426 YP_146611

Geobacillus thermodenitrificans NG80-2 YP_001124768996

999

1000

Geobacter metallireducens GS-15 YP_386423

Anaeromyxobacter dehalogenans 2CP-C YP_466383

Sorangium cellulosum So ce 56 YP_001619234861

Propionibacterium acnes KPA171202 YP_056649

Mycobacterium avium subsp. paratuberculosis K-10 NP_962115

Mycobacterium avium 104 YP_8831641000

Mycobacterium sp. KMS YP_937591

Mycobacterium sp. JLS YP_001069828

Mycobacterium sp. MCS YP_6387368531000

779

998

1000

957

Syntrophobacter fumaroxidans MPOB YP_847042

Anaeromyxobacter dehalogenans 2CP-C YP_464614

Anaeromyxobacter sp. Fw109-5 YP_0013796121000833

Synechocystis sp. PCC 6803 NP_442983

Acaryochloris marina MBIC11017 YP_001514849

Acaryochloris marina MBIC11017 YP_0015207989981000

Sorangium cellulosum So ce 56 YP_001613920

Campylobacter curvus 525.92 YP_001407973

Campylobacter concisus 13826 YP_0014664131000

Mannheimia succiniciproducens MBEL55E YP_087486

Actinobacillus succinogenes 130Z YP_0013448911000

Neisseria gonorrhoeae FA 1090 YP_208344

Neisseria meningitidis MC58 NP_274628

Neisseria meningitidis 053442 YP_001599647

Neisseria meningitidis Z2491 NP_284596

Neisseria meningitidis FAM18 YP_975519350

657871

1000

947

Psychrobacter sp. PRwf-1 YP_001280413

Acidovorax sp. JS42 YP_984423

Herminiimonas arsenicoxydans YP_001098413

Sphingomonas wittichii RW1 YP_001265090906232

Hahella chejuensis KCTC 2396 YP_432036

Idiomarina loihiensis L2TR YP_154578

Pseudoalteromonas haloplanktis TAC125 YP_340908951403

Bordetella petrii DSM 12804 YP_001632171

Ralstonia metallidurans CH34 YP_585308

Ralstonia eutropha H16 NP_942879

Ralstonia eutropha JMP134 YP_299247

Ralstonia eutropha H16 YP_841835775977

854

811

440

536

531

363

1000

925

Flavobacterium johnsoniae UW101 YP_001194759

Corynebacterium diphtheriae NCTC 13129 NP_940552

Solibacter usitatus Ellin6076 YP_824206530156

Acidobacteria bacterium Ellin345 YP_589443

Anaeromyxobacter dehalogenans 2CP-C YP_466923

Anaeromyxobacter sp. Fw109-5 YP_0013810111000354

338

Xanthobacter autotrophicus Py2 YP_001417931

Sphingomonas wittichii RW1 YP_001260078

Parvibaculum lavamentivorans DS-1 YP_001412284997590

Shewanella amazonensis SB2B YP_926606

Shewanella loihica PV-4 YP_001092788

Shewanella sediminis HAW-EB3 YP_001475554

Shewanella woodyi ATCC 51908 YP_001759151

Shewanella halifaxensis HAW-EB4 YP_001675756531229

Shewanella frigidimarina NCIMB 400 YP_751928

Shewanella sp. W3-18-1 YP_962277

Shewanella putrefaciens CN-32 YP_0011845841000

Shewanella sp. MR-7 YP_736939

Shewanella sp. ANA-3 YP_868490

Shewanella sp. MR-4 YP_735217666546

881

247

340

348

1000

Rhodoferax ferrireducens T118 YP_523143

Herminiimonas arsenicoxydans YP_001099949

Polaromonas naphthalenivorans CJ2 YP_9815649971000

Ralstonia solanacearum GMI1000 NP_523064

Chromobacterium violaceum ATCC 12472 NP_903164

Burkholderia thailandensis E264 YP_442345

Burkholderia pseudomallei 668 YP_001059704

Burkholderia pseudomallei 1710b YP_334186766

Burkholderia pseudomallei 1106a YP_001066989

Burkholderia pseudomallei K96243 YP_108946391

Burkholderia mallei NCTC 10229 YP_001028854

Burkholderia mallei NCTC 10247 YP_001081235468

Burkholderia mallei SAVP1 YP_993685

Burkholderia mallei ATCC 23344 YP_102415869

551

377

972

1000

704

1000

460

448

988

1000

935

968

520

708

988

997

1000

0.1

Arcobacter butzleri RM4018 YP_001490279

Crenarchaeota (Archaea)Desulfitobacterium hafniense

1000

993

545

996

659

Haloarcula marismortui ATCC 43049Halorubrum lacusprofundi ATCC 492391000

620

1000

935

968

520

708

1000

Epsilon ProteobacteriaGamma Proteobacteria

Delta ProteobacteriaBeta Proteobacteria

979

Gamma ProteobacteriaBeta Proteobacteria

985

Gamma ProteobacteriaBeta ProteobacteriaAlpha Proteobacteria

Gamma ProteobacteriaBeta Proteobacteria

Firmicutes

957

Delta ProteobacteriaActinobacteria

972

Delta ProteobacteriaCyanobacteria

925

Delta ProteobacteriaEpsilon ProteobacteriaGamma ProteobacteriaAlpha ProteobacteriaBeta Proteobacteria

BacteroidetesActinobacteriaAcidobacteriaDelta ProteobacteriaGamma ProteobacteriaAlpha ProteobacteriaBeta Proteobacteria

A B

ARCHAEA

BACTERIA

Bacteroidetes/Chlorobi (1/17)

Aquificales (0/1)Thermotogales (0/6)

Acidobacteria (2/2)

Crenarchaeota (5/15)+Korarchaeota (0/1)

Euryarchaeota (2/35)+Nanoarchaeota (0/1)

Deinococcus/Thermus (0/4)Chloroflexii (0/7)

Cyanobacteria (2/32)

Firmicutes (6/144)

Actinobacteria (7/50)

Spirochaetes (0/9)

PVC (0/15)

Epsilon-Proteobacteria (6/19)

Delta-Proteobacteria (6/19)

Alpha-Proteobacteria (28/83)

Beta-Proteobacteria (32/53)Gamma-Proteobacteria

(32/157)

Thaumarchaeota (0/2)

Fusobacteria (0/1)

C


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